RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 BICC1Q9H694 974 aaKnown RBP26.36■■□□□ 1.81
PTP4A2-215ENST00000533408 HMMRO75330 724 aa26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 IFIT5Q13325 482 aaKnown RBP26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 ERICH6BQ5W0A0 696 aa26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 STYK1Q6J9G0 422 aa26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 KLHL34Q8N239 644 aa26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 CDC5LQ99459 802 aaKnown RBP26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 CHMP3Q9Y3E7 222 aa26.35■■□□□ 1.81
PTP4A2-215ENST00000533408 RTL9Q8NET4 1388 aa26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 SRGNP10124 158 aa26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 HOXA10P31260 410 aaPredicted RBP26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 MTX1Q13505 466 aa26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 CNKSR1Q969H4 720 aa26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 CRAMP1Q96RY5 1269 aa26.34■■□□□ 1.81
PTP4A2-215ENST00000533408 ANKRD18BA2A2Z9 1011 aa26.33■■□□□ 1.81
PTP4A2-215ENST00000533408 KAZALD1Q96I82 304 aa26.33■■□□□ 1.81
PTP4A2-215ENST00000533408 ATP8B2P98198 1209 aa26.32■■□□□ 1.8
PTP4A2-215ENST00000533408 TAF7LQ5H9L4 462 aa26.32■■□□□ 1.8
PTP4A2-215ENST00000533408 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
PTP4A2-215ENST00000533408 EXOC6Q8TAG9 804 aa26.32■■□□□ 1.8
PTP4A2-215ENST00000533408 TMX4Q9H1E5 349 aaPredicted RBP26.32■■□□□ 1.8
PTP4A2-215ENST00000533408 BBOX1O75936 387 aa26.31■■□□□ 1.8
PTP4A2-215ENST00000533408 IRX6P78412 446 aaPredicted RBP26.31■■□□□ 1.8
PTP4A2-215ENST00000533408 ANKRD44Q8N8A2 993 aa26.31■■□□□ 1.8
PTP4A2-215ENST00000533408 SRGAP3O43295 1099 aa26.3■■□□□ 1.8
PTP4A2-215ENST00000533408 EPHA10Q5JZY3 1008 aa26.3■■□□□ 1.8
PTP4A2-215ENST00000533408 ZNF622Q969S3 477 aaKnown RBP eCLIP26.3■■□□□ 1.8
PTP4A2-215ENST00000533408 LAMB2P55268 1798 aa26.29■■□□□ 1.8
PTP4A2-215ENST00000533408 ITGA6P23229 1130 aa26.29■■□□□ 1.8
PTP4A2-215ENST00000533408 FHDC1Q9C0D6 1143 aaPredicted RBP26.29■■□□□ 1.8
PTP4A2-215ENST00000533408 GREM2Q9H772 168 aa26.29■■□□□ 1.8
PTP4A2-215ENST00000533408 PIM2Q9P1W9 311 aa26.29■■□□□ 1.8
PTP4A2-215ENST00000533408 IGHMBP2P38935 993 aaKnown RBP26.28■■□□□ 1.8
PTP4A2-215ENST00000533408 ANKRD18AQ8IVF6 992 aa26.28■■□□□ 1.8
PTP4A2-215ENST00000533408 C1orf115Q9H7X2 142 aa26.28■■□□□ 1.8
PTP4A2-215ENST00000533408 FBXO3Q9UK99 471 aa26.28■■□□□ 1.8
PTP4A2-215ENST00000533408 DPEP1P16444 411 aa26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 RPS8P62241 208 aaKnown RBP26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 GRAPQ13588 217 aa26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 CEP85Q6P2H3 762 aa26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 C3orf67Q6ZVT6 689 aa26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 GRAPLQ8TC17 118 aaPredicted RBP26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 MPHOSPH8Q99549 860 aa26.27■■□□□ 1.8
PTP4A2-215ENST00000533408 DDX60Q8IY21 1712 aaKnown RBP26.26■■□□□ 1.79
PTP4A2-215ENST00000533408 A0A0G2JLW4 131 aa26.26■■□□□ 1.79
PTP4A2-215ENST00000533408 FAM161AQ3B820 660 aa26.26■■□□□ 1.79
PTP4A2-215ENST00000533408 TTLL6Q8N841 843 aa26.26■■□□□ 1.79
PTP4A2-215ENST00000533408 CCDC85AQ96PX6 553 aaPredicted RBP26.26■■□□□ 1.79
PTP4A2-215ENST00000533408 LRP5O75197 1615 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 CHRNA5P30532 468 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 HSP90AB4PQ58FF6 505 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 SSH3Q8TE77 659 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 SYT17Q9BSW7 474 aa26.25■■□□□ 1.79
PTP4A2-215ENST00000533408 KIF13BQ9NQT8 1826 aa26.24■■□□□ 1.79
PTP4A2-215ENST00000533408 SOGA3Q5TF21 947 aa26.23■■□□□ 1.79
PTP4A2-215ENST00000533408 CC2D2BQ6DHV5 1058 aa26.23■■□□□ 1.79
PTP4A2-215ENST00000533408 RWDD1Q9H446 243 aaPredicted RBP26.23■■□□□ 1.79
PTP4A2-215ENST00000533408 POLA2Q14181 598 aa26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 DALRD3Q5D0E6 543 aaKnown RBP26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 LDHAL6AQ6ZMR3 332 aa26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 COPRSQ9NQ92 184 aa26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 BSDC1Q9NW68 430 aaPredicted RBP26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 MYH3P11055 1940 aa26.22■■□□□ 1.79
PTP4A2-215ENST00000533408 SEC31BQ9NQW1 1179 aa26.21■■□□□ 1.79
PTP4A2-215ENST00000533408 ANKRD31Q8N7Z5 1873 aa26.21■■□□□ 1.79
PTP4A2-215ENST00000533408 PNMA6EA0A0J9YXQ4 647 aa26.2■■□□□ 1.78
PTP4A2-215ENST00000533408 KCNA3P22001 575 aa26.2■■□□□ 1.78
PTP4A2-215ENST00000533408 CNNM1Q9NRU3 951 aa26.2■■□□□ 1.78
PTP4A2-215ENST00000533408 TNRC6CQ9HCJ0 1690 aaKnown RBP26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 PPEF1O14829 653 aaPredicted RBP26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 CIAO1O76071 339 aa26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 G3BP1Q13283 466 aaKnown RBP eCLIP26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 PRPF40BQ6NWY9 871 aaKnown RBP26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 PCDHB15Q9Y5E8 787 aa26.19■■□□□ 1.78
PTP4A2-215ENST00000533408 RFX5P48382 616 aaPredicted RBP26.18■■□□□ 1.78
PTP4A2-215ENST00000533408 PTPN12Q05209 780 aaKnown RBP26.18■■□□□ 1.78
PTP4A2-215ENST00000533408 HDAC1Q13547 482 aaPredicted RBP26.18■■□□□ 1.78
PTP4A2-215ENST00000533408 CELF1Q92879 486 aaKnown RBP26.18■■□□□ 1.78
PTP4A2-215ENST00000533408 ANKRD2Q9GZV1 360 aa26.18■■□□□ 1.78
PTP4A2-215ENST00000533408 EYA2O00167 538 aa26.17■■□□□ 1.78
PTP4A2-215ENST00000533408 SURF6O75683 361 aaKnown RBP26.17■■□□□ 1.78
PTP4A2-215ENST00000533408 IL15P40933 162 aaPredicted RBP26.17■■□□□ 1.78
PTP4A2-215ENST00000533408 ERC1Q8IUD2 1116 aa26.17■■□□□ 1.78
PTP4A2-215ENST00000533408 ATP6V0A2Q9Y487 856 aa26.17■■□□□ 1.78
PTP4A2-215ENST00000533408 MROH5Q6ZUA9 1318 aa26.16■■□□□ 1.78
PTP4A2-215ENST00000533408 OS9Q13438 667 aaPredicted RBP26.16■■□□□ 1.78
PTP4A2-215ENST00000533408 NLGN2Q8NFZ4 835 aa26.16■■□□□ 1.78
PTP4A2-215ENST00000533408 NOP58Q9Y2X3 529 aaKnown RBP26.16■■□□□ 1.78
PTP4A2-215ENST00000533408 SIRT2Q8IXJ6 389 aa26.15■■□□□ 1.78
PTP4A2-215ENST00000533408 RAB11FIP3O75154 756 aa26.14■■□□□ 1.78
PTP4A2-215ENST00000533408 RTKN2Q8IZC4 609 aa26.14■■□□□ 1.78
PTP4A2-215ENST00000533408 ZNF594Q96JF6 807 aaPredicted RBP26.14■■□□□ 1.78
PTP4A2-215ENST00000533408 GCC1Q96CN9 775 aa26.13■■□□□ 1.77
PTP4A2-215ENST00000533408 ZBTB47Q9UFB7 747 aaPredicted RBP26.13■■□□□ 1.77
PTP4A2-215ENST00000533408 BCS1LQ9Y276 419 aa26.13■■□□□ 1.77
PTP4A2-215ENST00000533408 DCAF8L1A6NGE4 600 aa26.12■■□□□ 1.77
PTP4A2-215ENST00000533408 DCTPP1Q9H773 170 aa26.12■■□□□ 1.77
PTP4A2-215ENST00000533408 CEP126Q9P2H0 1117 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms