RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 CHMP3Q9Y3E7 222 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 GJB2P29033 226 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 ATG9AQ7Z3C6 839 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 DNAJC2Q99543 621 aaKnown RBP18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 PARP4Q9UKK3 1724 aaKnown RBP18.38■□□□□ 0.53
CACNA1E-208ENST00000533229 CCDC173Q0VFZ6 552 aa18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 SEC62Q99442 399 aaKnown RBP18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 CWC25Q9NXE8 425 aaPredicted RBP18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 JCADQ9P266 1359 aa18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
CACNA1E-208ENST00000533229 ESPNB1AK53 854 aa18.36■□□□□ 0.53
CACNA1E-208ENST00000533229 F13A1P00488 732 aa18.36■□□□□ 0.53
CACNA1E-208ENST00000533229 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
CACNA1E-208ENST00000533229 CLCN1P35523 988 aa18.36■□□□□ 0.53
CACNA1E-208ENST00000533229 TRIM44Q96DX7 344 aaPredicted RBP18.36■□□□□ 0.53
CACNA1E-208ENST00000533229 CCDC129Q6ZRS4 1044 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 HAUS7Q99871 368 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 PSMA5P28066 241 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 TIMM10P62072 90 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 USPL1Q5W0Q7 1092 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 TMEM87AQ8NBN3 555 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 MTMR6Q9Y217 621 aa18.35■□□□□ 0.53
CACNA1E-208ENST00000533229 ZNF609O15014 1411 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 AFDNP55196 1824 aaKnown RBP18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 LAMB4A4D0S4 1761 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 KDM4FA0A1W2PPD8 638 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 BLOC1S2Q6QNY1 142 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 RPS6KB1P23443 525 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 EVA1CP58658 441 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 TSGA10IPQ3SY00 556 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 SLFNL1Q499Z3 407 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
CACNA1E-208ENST00000533229 TNS2Q63HR2 1409 aa18.33■□□□□ 0.53
CACNA1E-208ENST00000533229 NEUROD6Q96NK8 337 aa18.33■□□□□ 0.52
CACNA1E-208ENST00000533229 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
CACNA1E-208ENST00000533229 UBR2Q8IWV8 1755 aa18.32■□□□□ 0.52
CACNA1E-208ENST00000533229 TPRNQ4KMQ1 711 aa18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 HMG20BQ9P0W2 317 aa18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 DNM1Q05193 864 aaKnown RBP18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 MCMDC2Q4G0Z9 681 aa18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 KBTBD3Q8NAB2 608 aa18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 ALDH8A1Q9H2A2 487 aaPredicted RBP18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 ASAP1Q9ULH1 1129 aa18.31■□□□□ 0.52
CACNA1E-208ENST00000533229 EYA2O00167 538 aa18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 FIBPO43427 364 aa18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 IL15P40933 162 aaPredicted RBP18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 RNF214Q8ND24 703 aa18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 ISCA1Q9BUE6 129 aa18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 ZNF330Q9Y3S2 320 aaPredicted RBP18.3■□□□□ 0.52
CACNA1E-208ENST00000533229 GOLIM4O00461 696 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 CYP21A2P08686 494 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 PDLIM2Q96JY6 352 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 RFX7Q2KHR2 1363 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 VPS37CA5D8V6 355 aaPredicted RBP18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 PIGBQ92521 554 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 GPR108Q9NPR9 543 aa18.29■□□□□ 0.52
CACNA1E-208ENST00000533229 PAPPAQ13219 1627 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 NUP188Q5SRE5 1749 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 ANKRD1Q15327 319 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 SYAP1Q96A49 352 aaPredicted RBP18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 PAG1Q9NWQ8 432 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 ATP6V1DQ9Y5K8 247 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 SHANK3Q9BYB0 1731 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 STRCQ7RTU9 1775 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 STK3Q13188 491 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 TCIRG1Q13488 830 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 LARP1BQ659C4 914 aaKnown RBP18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 DNAJC10Q8IXB1 793 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 TJP1Q07157 1748 aa18.28■□□□□ 0.52
CACNA1E-208ENST00000533229 A0A1B0GUL7 405 aa18.27■□□□□ 0.52
CACNA1E-208ENST00000533229 UBE2HP62256 183 aa18.27■□□□□ 0.52
CACNA1E-208ENST00000533229 CDC37L1Q7L3B6 337 aa18.27■□□□□ 0.52
CACNA1E-208ENST00000533229 NEK1Q96PY6 1258 aa18.27■□□□□ 0.52
CACNA1E-208ENST00000533229 TSPY26PQ9H489 355 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 ATG3Q9NT62 314 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 KRT32Q14532 448 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 STOX1Q6ZVD7 989 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 FAM89AQ96GI7 184 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 BTG4Q9NY30 223 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 SH3TC1Q8TE82 1336 aa18.26■□□□□ 0.51
CACNA1E-208ENST00000533229 PALLDQ8WX93 1383 aa18.25■□□□□ 0.51
CACNA1E-208ENST00000533229 CIAO1O76071 339 aa18.25■□□□□ 0.51
CACNA1E-208ENST00000533229 FAM173BQ6P4H8 233 aa18.25■□□□□ 0.51
CACNA1E-208ENST00000533229 FERMT3Q86UX7 667 aa18.25■□□□□ 0.51
CACNA1E-208ENST00000533229 A0A0G2JLW4 131 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms