RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 KIAA2012Q0VF49 1180 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 HABP4Q5JVS0 413 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 DPP8Q6V1X1 898 aaPredicted RBP14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 MICALL2Q8IY33 904 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 AKAP11Q9UKA4 1901 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 MAP3K15Q6ZN16 1313 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 SLC10A3P09131 477 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 KIF6Q6ZMV9 814 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 SLC51AQ86UW1 340 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 DPF2Q92785 391 aa14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 DCPSQ96C86 337 aaKnown RBP14.92□□□□□ -0.02
TRAPPC4-213ENST00000533149 BBOX1O75936 387 aa14.91□□□□□ -0.02
TRAPPC4-213ENST00000533149 SUSD4Q5VX71 490 aa14.91□□□□□ -0.02
TRAPPC4-213ENST00000533149 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
TRAPPC4-213ENST00000533149 MPNDQ8N594 471 aa14.91□□□□□ -0.02
TRAPPC4-213ENST00000533149 GPTP24298 496 aa14.9□□□□□ -0.02
TRAPPC4-213ENST00000533149 DLK2Q6UY11 383 aa14.9□□□□□ -0.02
TRAPPC4-213ENST00000533149 PPP1R42Q7Z4L9 355 aa14.9□□□□□ -0.02
TRAPPC4-213ENST00000533149 NGEFQ8N5V2 710 aa14.9□□□□□ -0.02
TRAPPC4-213ENST00000533149 UBN2Q6ZU65 1347 aa14.89□□□□□ -0.03
TRAPPC4-213ENST00000533149 SHTN1A0MZ66 631 aa14.89□□□□□ -0.03
TRAPPC4-213ENST00000533149 SAMD7Q7Z3H4 446 aa14.89□□□□□ -0.03
TRAPPC4-213ENST00000533149 PHACTR3Q96KR7 559 aa14.89□□□□□ -0.03
TRAPPC4-213ENST00000533149 NTSR2O95665 410 aa14.88□□□□□ -0.03
TRAPPC4-213ENST00000533149 CCDC184Q52MB2 194 aa14.88□□□□□ -0.03
TRAPPC4-213ENST00000533149 C3orf67Q6ZVT6 689 aa14.88□□□□□ -0.03
TRAPPC4-213ENST00000533149 ZNF34Q8IZ26 560 aa14.88□□□□□ -0.03
TRAPPC4-213ENST00000533149 ABCC4O15439 1325 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 YDJCA8MPS7 323 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 ADM5C9JUS6 153 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 RPS12P25398 132 aaKnown RBP14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 PRKAR2BP31323 418 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 TBC1D10BQ4KMP7 808 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 PARP10Q53GL7 1025 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 SLC10A5Q5PT55 438 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 FBXO46Q6PJ61 603 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 MCM10Q7L590 875 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 SULF1Q8IWU6 871 aa14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 ZNF296Q8WUU4 475 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 ZBTB12Q9Y330 459 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-213ENST00000533149 NUP98P52948 1817 aa14.86□□□□□ -0.03
TRAPPC4-213ENST00000533149 MYBBP1AQ9BQG0 1328 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-213ENST00000533149 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
TRAPPC4-213ENST00000533149 ZBTB3Q9H5J0 574 aa14.86□□□□□ -0.03
TRAPPC4-213ENST00000533149 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
TRAPPC4-213ENST00000533149 HTATSF1O43719 755 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 FKBP1BP68106 108 aa14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 TAF7Q15545 349 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 NOM1Q5C9Z4 860 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 GIGYF2Q6Y7W6 1299 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 RASAL3Q86YV0 1011 aa14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 MRS2Q9HD23 443 aa14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 RRP7AQ9Y3A4 280 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-213ENST00000533149 PSMD14O00487 310 aa14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 PPP2R1AP30153 589 aa14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 UTP14AQ9BVJ6 771 aaKnown RBP14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 RSPH6AQ9H0K4 717 aa14.84□□□□□ -0.03
TRAPPC4-213ENST00000533149 TBC1D8O95759 1140 aa14.83□□□□□ -0.04
TRAPPC4-213ENST00000533149 EGFRP00533 1210 aa14.83□□□□□ -0.04
TRAPPC4-213ENST00000533149 WASHC4Q2M389 1173 aa14.83□□□□□ -0.04
TRAPPC4-213ENST00000533149 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
TRAPPC4-213ENST00000533149 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.04
TRAPPC4-213ENST00000533149 GPR25O00155 361 aa14.82□□□□□ -0.04
TRAPPC4-213ENST00000533149 MYL6BP14649 208 aa14.82□□□□□ -0.04
TRAPPC4-213ENST00000533149 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
TRAPPC4-213ENST00000533149 CDCA5Q96FF9 252 aa14.82□□□□□ -0.04
TRAPPC4-213ENST00000533149 FXR1P51114 621 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 GRAPQ13588 217 aa14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 INTS3Q68E01 1043 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 GGA3Q9NZ52 723 aa14.81□□□□□ -0.04
TRAPPC4-213ENST00000533149 POLR2AP24928 1970 aaKnown RBP14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 MIS18AQ9NYP9 233 aa14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
TRAPPC4-213ENST00000533149 FKTNO75072 461 aa14.79□□□□□ -0.04
TRAPPC4-213ENST00000533149 TM4SF4P48230 202 aa14.79□□□□□ -0.04
TRAPPC4-213ENST00000533149 ERBB4Q15303 1308 aa14.79□□□□□ -0.04
TRAPPC4-213ENST00000533149 NSFL1CQ9UNZ2 370 aaKnown RBP14.78□□□□□ -0.04
TRAPPC4-213ENST00000533149 PAPPA2Q9BXP8 1791 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 RIMBP2O15034 1052 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 ECE2O60344 883 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 HCLS1P14317 486 aaPredicted RBP14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 SREBF2Q12772 1141 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 EYA3Q99504 573 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 CFHR5Q9BXR6 569 aa14.77□□□□□ -0.04
TRAPPC4-213ENST00000533149 DUOX1Q9NRD9 1551 aa14.77□□□□□ -0.05
TRAPPC4-213ENST00000533149 ANKRD36CQ5JPF3 1778 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 VIL1P09327 827 aaKnown RBP14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 U2AF1L5P0DN76 240 aaPredicted RBP14.76□□□□□ -0.05
TRAPPC4-213ENST00000533149 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms