RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
HIF3A-215ENST00000533145 RTL9Q8NET4 1388 aa17.54■□□□□ 0.4
HIF3A-215ENST00000533145 MMP10P09238 476 aa17.54■□□□□ 0.4
HIF3A-215ENST00000533145 NOP58Q9Y2X3 529 aaKnown RBP17.54■□□□□ 0.4
HIF3A-215ENST00000533145 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
HIF3A-215ENST00000533145 ST5P78524 1137 aa17.53■□□□□ 0.4
HIF3A-215ENST00000533145 NLRP3Q96P20 1036 aa17.53■□□□□ 0.4
HIF3A-215ENST00000533145 COPRSQ9NQ92 184 aa17.53■□□□□ 0.4
HIF3A-215ENST00000533145 KLRG2A4D1S0 409 aaPredicted RBP17.52■□□□□ 0.4
HIF3A-215ENST00000533145 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.4
HIF3A-215ENST00000533145 MSL1Q68DK7 614 aa17.52■□□□□ 0.4
HIF3A-215ENST00000533145 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
HIF3A-215ENST00000533145 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 HSP90AB4PQ58FF6 505 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 ANKRD31Q8N7Z5 1873 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 MTFR1LQ9H019 292 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 FBXO3Q9UK99 471 aa17.51■□□□□ 0.39
HIF3A-215ENST00000533145 NPHP1O15259 732 aa17.5■□□□□ 0.39
HIF3A-215ENST00000533145 RAB11FIP3O75154 756 aa17.5■□□□□ 0.39
HIF3A-215ENST00000533145 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
HIF3A-215ENST00000533145 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
HIF3A-215ENST00000533145 GREM2Q9H772 168 aa17.5■□□□□ 0.39
HIF3A-215ENST00000533145 TNRC6CQ9HCJ0 1690 aaKnown RBP17.49■□□□□ 0.39
HIF3A-215ENST00000533145 ANKRD18BA2A2Z9 1011 aa17.49■□□□□ 0.39
HIF3A-215ENST00000533145 ITGA6P23229 1130 aa17.49■□□□□ 0.39
HIF3A-215ENST00000533145 CHMP3Q9Y3E7 222 aa17.49■□□□□ 0.39
HIF3A-215ENST00000533145 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
HIF3A-215ENST00000533145 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
HIF3A-215ENST00000533145 CRY2Q49AN0 593 aa17.48■□□□□ 0.39
HIF3A-215ENST00000533145 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
HIF3A-215ENST00000533145 CIAO1O76071 339 aa17.47■□□□□ 0.39
HIF3A-215ENST00000533145 NUCB1Q02818 461 aa17.47■□□□□ 0.39
HIF3A-215ENST00000533145 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
HIF3A-215ENST00000533145 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
HIF3A-215ENST00000533145 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
HIF3A-215ENST00000533145 KIF13BQ9NQT8 1826 aa17.47■□□□□ 0.39
HIF3A-215ENST00000533145 PDE6BP35913 854 aa17.46■□□□□ 0.39
HIF3A-215ENST00000533145 G3BP1Q13283 466 aaKnown RBP eCLIP17.46■□□□□ 0.39
HIF3A-215ENST00000533145 ERC1Q8IUD2 1116 aa17.46■□□□□ 0.39
HIF3A-215ENST00000533145 EXOC6BQ9Y2D4 811 aa17.46■□□□□ 0.39
HIF3A-215ENST00000533145 TAF1P21675 1872 aa17.46■□□□□ 0.38
HIF3A-215ENST00000533145 EYA2O00167 538 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-215ENST00000533145 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 KIF1BPQ96EK5 621 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
HIF3A-215ENST00000533145 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
HIF3A-215ENST00000533145 SGIP1Q9BQI5 828 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 LRP5O75197 1615 aa17.45■□□□□ 0.38
HIF3A-215ENST00000533145 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-215ENST00000533145 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 ATG9AQ7Z3C6 839 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 ZNF594Q96JF6 807 aaPredicted RBP17.44■□□□□ 0.38
HIF3A-215ENST00000533145 LRRCC1Q9C099 1032 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
HIF3A-215ENST00000533145 SASH1O94885 1247 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 POLD1P28340 1107 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 DDX46Q7L014 1031 aaKnown RBP17.43■□□□□ 0.38
HIF3A-215ENST00000533145 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 ATF5Q9Y2D1 282 aaPredicted RBP17.43■□□□□ 0.38
HIF3A-215ENST00000533145 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
HIF3A-215ENST00000533145 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
HIF3A-215ENST00000533145 SRGNP10124 158 aa17.42■□□□□ 0.38
HIF3A-215ENST00000533145 IGHMBP2P38935 993 aaKnown RBP17.42■□□□□ 0.38
HIF3A-215ENST00000533145 RPS8P62241 208 aaKnown RBP17.42■□□□□ 0.38
HIF3A-215ENST00000533145 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
HIF3A-215ENST00000533145 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
HIF3A-215ENST00000533145 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
HIF3A-215ENST00000533145 SIL1Q9H173 461 aa17.42■□□□□ 0.38
HIF3A-215ENST00000533145 BSDC1Q9NW68 430 aaPredicted RBP17.42■□□□□ 0.38
HIF3A-215ENST00000533145 NPR1P16066 1061 aa17.41■□□□□ 0.38
HIF3A-215ENST00000533145 OS9Q13438 667 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-215ENST00000533145 GRAPQ13588 217 aa17.41■□□□□ 0.38
HIF3A-215ENST00000533145 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
HIF3A-215ENST00000533145 GRAPLQ8TC17 118 aaPredicted RBP17.41■□□□□ 0.38
HIF3A-215ENST00000533145 RPGRQ92834 1020 aaKnown RBP17.41■□□□□ 0.38
HIF3A-215ENST00000533145 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
HIF3A-215ENST00000533145 GPR108Q9NPR9 543 aa17.41■□□□□ 0.38
HIF3A-215ENST00000533145 COL4A1P02462 1669 aa17.4■□□□□ 0.38
HIF3A-215ENST00000533145 PTGER2P43116 358 aa17.4■□□□□ 0.38
HIF3A-215ENST00000533145 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
HIF3A-215ENST00000533145 MASTLQ96GX5 879 aa17.4■□□□□ 0.38
HIF3A-215ENST00000533145 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
HIF3A-215ENST00000533145 COL11A2P13942 1736 aaPredicted RBP17.4■□□□□ 0.38
HIF3A-215ENST00000533145 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
HIF3A-215ENST00000533145 BBOX1O75936 387 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 ALDH1B1P30837 517 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 CNNM1Q9NRU3 951 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 MROH5Q6ZUA9 1318 aa17.39■□□□□ 0.37
HIF3A-215ENST00000533145 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
HIF3A-215ENST00000533145 H0YIN7 160 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms