RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
NXF1-214ENST00000533048 FAM161AQ3B820 660 aa18.37■□□□□ 0.53
NXF1-214ENST00000533048 NUCB1Q02818 461 aa18.36■□□□□ 0.53
NXF1-214ENST00000533048 PTPN12Q05209 780 aaKnown RBP18.36■□□□□ 0.53
NXF1-214ENST00000533048 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
NXF1-214ENST00000533048 ANKRD31Q8N7Z5 1873 aa18.36■□□□□ 0.53
NXF1-214ENST00000533048 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
NXF1-214ENST00000533048 MMP10P09238 476 aa18.35■□□□□ 0.53
NXF1-214ENST00000533048 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
NXF1-214ENST00000533048 CCDC152Q4G0S7 254 aa18.35■□□□□ 0.53
NXF1-214ENST00000533048 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
NXF1-214ENST00000533048 GREM2Q9H772 168 aa18.35■□□□□ 0.53
NXF1-214ENST00000533048 FBXO3Q9UK99 471 aa18.35■□□□□ 0.53
NXF1-214ENST00000533048 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
NXF1-214ENST00000533048 ST5P78524 1137 aa18.34■□□□□ 0.53
NXF1-214ENST00000533048 IFIT5Q13325 482 aaKnown RBP18.34■□□□□ 0.53
NXF1-214ENST00000533048 CCDC57Q2TAC2 916 aa18.34■□□□□ 0.53
NXF1-214ENST00000533048 EXOC6BQ9Y2D4 811 aa18.34■□□□□ 0.53
NXF1-214ENST00000533048 KLRG2A4D1S0 409 aaPredicted RBP18.33■□□□□ 0.52
NXF1-214ENST00000533048 CIAO1O76071 339 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 ITGA6P23229 1130 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 CRY2Q49AN0 593 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 NLRP3Q96P20 1036 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 PA2G4Q9UQ80 394 aaKnown RBP18.33■□□□□ 0.52
NXF1-214ENST00000533048 CHMP3Q9Y3E7 222 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 PARP3Q9Y6F1 533 aa18.33■□□□□ 0.52
NXF1-214ENST00000533048 MSL1Q68DK7 614 aa18.32■□□□□ 0.52
NXF1-214ENST00000533048 CHD1LQ86WJ1 897 aa18.32■□□□□ 0.52
NXF1-214ENST00000533048 ERC1Q8IUD2 1116 aa18.32■□□□□ 0.52
NXF1-214ENST00000533048 ANKRD18BA2A2Z9 1011 aa18.31■□□□□ 0.52
NXF1-214ENST00000533048 KLHDC4Q8TBB5 520 aa18.31■□□□□ 0.52
NXF1-214ENST00000533048 KIF1BPQ96EK5 621 aa18.31■□□□□ 0.52
NXF1-214ENST00000533048 LRRCC1Q9C099 1032 aa18.31■□□□□ 0.52
NXF1-214ENST00000533048 COL4A1P02462 1669 aa18.31■□□□□ 0.52
NXF1-214ENST00000533048 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
NXF1-214ENST00000533048 NPHP1O15259 732 aa18.3■□□□□ 0.52
NXF1-214ENST00000533048 RHPN1Q8TCX5 695 aa18.3■□□□□ 0.52
NXF1-214ENST00000533048 BRIP1Q9BX63 1249 aa18.3■□□□□ 0.52
NXF1-214ENST00000533048 COL11A2P13942 1736 aaPredicted RBP18.29■□□□□ 0.52
NXF1-214ENST00000533048 EYA2O00167 538 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 SASH1O94885 1247 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 G3BP1Q13283 466 aaKnown RBP eCLIP18.29■□□□□ 0.52
NXF1-214ENST00000533048 R3HDM1Q15032 1099 aaKnown RBP18.29■□□□□ 0.52
NXF1-214ENST00000533048 ANKRD45Q5TZF3 282 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 ATG9AQ7Z3C6 839 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
NXF1-214ENST00000533048 MTFR1LQ9H019 292 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
NXF1-214ENST00000533048 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
NXF1-214ENST00000533048 A0A1B0GUL6 1792 aa18.28■□□□□ 0.52
NXF1-214ENST00000533048 IL15P40933 162 aaPredicted RBP18.28■□□□□ 0.52
NXF1-214ENST00000533048 CCDC24Q8N4L8 307 aa18.28■□□□□ 0.52
NXF1-214ENST00000533048 ZNF594Q96JF6 807 aaPredicted RBP18.28■□□□□ 0.52
NXF1-214ENST00000533048 CDC5LQ99459 802 aaKnown RBP18.28■□□□□ 0.52
NXF1-214ENST00000533048 TAF1P21675 1872 aa18.27■□□□□ 0.52
NXF1-214ENST00000533048 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
NXF1-214ENST00000533048 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
NXF1-214ENST00000533048 SIL1Q9H173 461 aa18.27■□□□□ 0.52
NXF1-214ENST00000533048 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.52
NXF1-214ENST00000533048 PDE4AP27815 886 aa18.26■□□□□ 0.51
NXF1-214ENST00000533048 OS9Q13438 667 aaPredicted RBP18.26■□□□□ 0.51
NXF1-214ENST00000533048 TAF7LQ5H9L4 462 aa18.26■□□□□ 0.51
NXF1-214ENST00000533048 RIPOR2Q9Y4F9 1068 aa18.26■□□□□ 0.51
NXF1-214ENST00000533048 DLEC1Q9Y238 1755 aa18.26■□□□□ 0.51
NXF1-214ENST00000533048 SALL3Q9BXA9 1300 aa18.25■□□□□ 0.51
NXF1-214ENST00000533048 PDE6BP35913 854 aa18.25■□□□□ 0.51
NXF1-214ENST00000533048 LRRC24Q50LG9 513 aa18.25■□□□□ 0.51
NXF1-214ENST00000533048 LDHAL6AQ6ZMR3 332 aa18.25■□□□□ 0.51
NXF1-214ENST00000533048 PUS3Q9BZE2 481 aaKnown RBP18.25■□□□□ 0.51
NXF1-214ENST00000533048 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
NXF1-214ENST00000533048 ZBTB47Q9UFB7 747 aaPredicted RBP18.25■□□□□ 0.51
NXF1-214ENST00000533048 LRRC37AA6NMS7 1700 aa18.24■□□□□ 0.51
NXF1-214ENST00000533048 APBB1O00213 710 aa18.24■□□□□ 0.51
NXF1-214ENST00000533048 SMARCA5O60264 1052 aaPredicted RBP18.24■□□□□ 0.51
NXF1-214ENST00000533048 IGHMBP2P38935 993 aaKnown RBP18.24■□□□□ 0.51
NXF1-214ENST00000533048 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
NXF1-214ENST00000533048 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
NXF1-214ENST00000533048 SGIP1Q9BQI5 828 aa18.24■□□□□ 0.51
NXF1-214ENST00000533048 ZBTB7AO95365 584 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 SKAP1Q86WV1 359 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
NXF1-214ENST00000533048 VGLL2Q8N8G2 317 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 RPGRQ92834 1020 aaKnown RBP18.23■□□□□ 0.51
NXF1-214ENST00000533048 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
NXF1-214ENST00000533048 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.23■□□□□ 0.51
NXF1-214ENST00000533048 ARAP2Q8WZ64 1704 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 ZNF609O15014 1411 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 MROH5Q6ZUA9 1318 aa18.23■□□□□ 0.51
NXF1-214ENST00000533048 SRGNP10124 158 aa18.22■□□□□ 0.51
NXF1-214ENST00000533048 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
NXF1-214ENST00000533048 TFCP2Q12800 502 aa18.22■□□□□ 0.51
NXF1-214ENST00000533048 GRAPQ13588 217 aa18.22■□□□□ 0.51
NXF1-214ENST00000533048 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
NXF1-214ENST00000533048 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
NXF1-214ENST00000533048 MPHOSPH8Q99549 860 aa18.22■□□□□ 0.51
NXF1-214ENST00000533048 IL1RAPL2Q9NP60 686 aa18.22■□□□□ 0.51
NXF1-214ENST00000533048 KIAA1551Q9HCM1 1747 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms