RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 ZSCAN31Q96LW9 406 aaPredicted RBP21.46■■□□□ 1.03
UBXN1-213ENST00000532904 LARP6Q9BRS8 491 aaKnown RBP21.46■■□□□ 1.03
UBXN1-213ENST00000532904 ZMYND15Q9H091 742 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 TMOD3Q9NYL9 352 aa21.46■■□□□ 1.03
UBXN1-213ENST00000532904 ADCY5O95622 1261 aa21.45■■□□□ 1.02
UBXN1-213ENST00000532904 NBPF26B4DH59 902 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 HCLS1P14317 486 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-213ENST00000532904 NBPF14Q5TI25 921 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 NBPF10Q6P3W6 841 aaKnown RBP21.44■■□□□ 1.02
UBXN1-213ENST00000532904 MTERF4Q7Z6M4 381 aaKnown RBP21.44■■□□□ 1.02
UBXN1-213ENST00000532904 NBPF15Q8N660 670 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 PIBF1Q8WXW3 757 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 FUCA2Q9BTY2 467 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 BICC1Q9H694 974 aaKnown RBP21.44■■□□□ 1.02
UBXN1-213ENST00000532904 ZSWIM6Q9HCJ5 1215 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 SH2B1Q9NRF2 756 aaPredicted RBP21.44■■□□□ 1.02
UBXN1-213ENST00000532904 PDRG1Q9NUG6 133 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 CPA1P15085 419 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 PTH1RQ03431 593 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 MTMR6Q9Y217 621 aa21.44■■□□□ 1.02
UBXN1-213ENST00000532904 FIBPO43427 364 aa21.43■■□□□ 1.02
UBXN1-213ENST00000532904 GJB2P29033 226 aa21.43■■□□□ 1.02
UBXN1-213ENST00000532904 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-213ENST00000532904 CCDC83Q8IWF9 413 aa21.43■■□□□ 1.02
UBXN1-213ENST00000532904 CLASRPQ8N2M8 674 aaKnown RBP21.43■■□□□ 1.02
UBXN1-213ENST00000532904 KDM4AO75164 1064 aa21.43■■□□□ 1.02
UBXN1-213ENST00000532904 TEX13AQ9BXU3 409 aaPredicted RBP21.43■■□□□ 1.02
UBXN1-213ENST00000532904 ECHDC1Q9NTX5 307 aa21.43■■□□□ 1.02
UBXN1-213ENST00000532904 NRAPQ86VF7 1730 aa21.42■■□□□ 1.02
UBXN1-213ENST00000532904 JAKMIP1Q96N16 626 aaKnown RBP21.42■■□□□ 1.02
UBXN1-213ENST00000532904 CYP46A1Q9Y6A2 500 aa21.42■■□□□ 1.02
UBXN1-213ENST00000532904 ADCK5Q3MIX3 580 aa21.41■■□□□ 1.02
UBXN1-213ENST00000532904 GPATCH3Q96I76 525 aa21.41■■□□□ 1.02
UBXN1-213ENST00000532904 CDCA7Q9BWT1 371 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-213ENST00000532904 PIP4K2AP48426 406 aaPredicted RBP21.41■■□□□ 1.02
UBXN1-213ENST00000532904 PRPF40BQ6NWY9 871 aaKnown RBP21.41■■□□□ 1.02
UBXN1-213ENST00000532904 DNM1Q05193 864 aaKnown RBP21.4■■□□□ 1.02
UBXN1-213ENST00000532904 NECTIN1Q15223 517 aa21.4■■□□□ 1.02
UBXN1-213ENST00000532904 MYRIPQ8NFW9 859 aa21.4■■□□□ 1.02
UBXN1-213ENST00000532904 PTCD1O75127 700 aaKnown RBP21.4■■□□□ 1.02
UBXN1-213ENST00000532904 NOLC1Q14978 699 aaKnown RBP eCLIP21.4■■□□□ 1.02
UBXN1-213ENST00000532904 EVI5LQ96CN4 794 aa21.4■■□□□ 1.02
UBXN1-213ENST00000532904 ZNF830Q96NB3 372 aaPredicted RBP21.4■■□□□ 1.02
UBXN1-213ENST00000532904 ST3GAL1Q11201 340 aa21.39■■□□□ 1.01
UBXN1-213ENST00000532904 RABL6Q3YEC7 729 aaPredicted RBP21.39■■□□□ 1.01
UBXN1-213ENST00000532904 PIGBQ92521 554 aa21.39■■□□□ 1.01
UBXN1-213ENST00000532904 PRIMPOLQ96LW4 560 aa21.39■■□□□ 1.01
UBXN1-213ENST00000532904 CCDC171Q6TFL3 1326 aa21.39■■□□□ 1.01
UBXN1-213ENST00000532904 EXOC5O00471 708 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 GIMAP6Q6P9H5 292 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 SPTLC3Q9NUV7 552 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 THRAP3Q9Y2W1 955 aaKnown RBP21.38■■□□□ 1.01
UBXN1-213ENST00000532904 NWD2Q9ULI1 1742 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 BCL9O00512 1426 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 A1BGP04217 495 aa21.38■■□□□ 1.01
UBXN1-213ENST00000532904 IFIT2P09913 472 aaKnown RBP21.38■■□□□ 1.01
UBXN1-213ENST00000532904 G3BP1Q13283 466 aaKnown RBP eCLIP21.38■■□□□ 1.01
UBXN1-213ENST00000532904 TTC12Q9H892 705 aaPredicted RBP21.38■■□□□ 1.01
UBXN1-213ENST00000532904 PDIA4P13667 645 aaKnown RBP21.37■■□□□ 1.01
UBXN1-213ENST00000532904 CASP7P55210 303 aa21.37■■□□□ 1.01
UBXN1-213ENST00000532904 ME3Q16798 604 aa21.37■■□□□ 1.01
UBXN1-213ENST00000532904 MPNDQ8N594 471 aa21.37■■□□□ 1.01
UBXN1-213ENST00000532904 PA2G4Q9UQ80 394 aaKnown RBP21.37■■□□□ 1.01
UBXN1-213ENST00000532904 ZKSCAN1P17029 563 aaPredicted RBP21.36■■□□□ 1.01
UBXN1-213ENST00000532904 TPRNQ4KMQ1 711 aa21.36■■□□□ 1.01
UBXN1-213ENST00000532904 DNTTIP2Q5QJE6 756 aaKnown RBP21.36■■□□□ 1.01
UBXN1-213ENST00000532904 TJP1Q07157 1748 aa21.36■■□□□ 1.01
UBXN1-213ENST00000532904 COPRSQ9NQ92 184 aa21.36■■□□□ 1.01
UBXN1-213ENST00000532904 SNRKQ9NRH2 765 aa21.36■■□□□ 1.01
UBXN1-213ENST00000532904 ATG3Q9NT62 314 aa21.36■■□□□ 1.01
UBXN1-213ENST00000532904 A0A087WZG4 1122 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 H7C1W4 665 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 HIP1O00291 1037 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 HMGN5P82970 282 aaKnown RBP21.35■■□□□ 1.01
UBXN1-213ENST00000532904 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 CREB3L3Q68CJ9 461 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 TTLL7Q6ZT98 887 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 RBM8AQ9Y5S9 174 aaKnown RBP21.35■■□□□ 1.01
UBXN1-213ENST00000532904 TOM1O60784 492 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 UBE3BQ7Z3V4 1068 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 MAP4K1Q92918 833 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 PKNOX2Q96KN3 472 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 ASAP1Q9ULH1 1129 aa21.35■■□□□ 1.01
UBXN1-213ENST00000532904 VPS37CA5D8V6 355 aaPredicted RBP21.34■■□□□ 1.01
UBXN1-213ENST00000532904 SASH1O94885 1247 aa21.34■■□□□ 1.01
UBXN1-213ENST00000532904 GTF2F1P35269 517 aaKnown RBP eCLIP21.34■■□□□ 1.01
UBXN1-213ENST00000532904 AACSQ86V21 672 aa21.34■■□□□ 1.01
UBXN1-213ENST00000532904 CCDC191Q8NCU4 936 aa21.34■■□□□ 1.01
UBXN1-213ENST00000532904 CWC25Q9NXE8 425 aaPredicted RBP21.34■■□□□ 1.01
UBXN1-213ENST00000532904 SPATA31A1Q5TZJ5 1347 aa21.34■■□□□ 1.01
UBXN1-213ENST00000532904 ATP5J2-PTCD1G3V325 749 aa21.33■■□□□ 1.01
UBXN1-213ENST00000532904 AP5Z1O43299 807 aa21.33■■□□□ 1.01
UBXN1-213ENST00000532904 TPCN1Q9ULQ1 816 aa21.33■■□□□ 1.01
UBXN1-213ENST00000532904 STARD3NLO95772 234 aa21.33■■□□□ 1
UBXN1-213ENST00000532904 TPM3P06753 285 aa21.33■■□□□ 1
UBXN1-213ENST00000532904 RFX5P48382 616 aaPredicted RBP21.33■■□□□ 1
UBXN1-213ENST00000532904 NECAB1Q8N987 351 aa21.33■■□□□ 1
UBXN1-213ENST00000532904 CCDC192P0DO97 292 aa21.32■■□□□ 1
UBXN1-213ENST00000532904 PSMA5P28066 241 aa21.32■■□□□ 1
UBXN1-213ENST00000532904 ELP1O95163 1332 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms