RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CLASP1Q7Z460 1538 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 METAP2P50579 478 aaKnown RBP eCLIP17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 ATP7BP35670 1465 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 HECW2Q9P2P5 1572 aa17.81■□□□□ 0.44
PCDHA3-202ENST00000532566 Q6ZUG5 572 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 CLIP2Q9UDT6 1046 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 CCDC171Q6TFL3 1326 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 EFCAB6Q5THR3 1501 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 TFCP2Q12800 502 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
PCDHA3-202ENST00000532566 ARAP3Q8WWN8 1544 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 MFSD6Q6ZSS7 791 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 FAM177A1Q8N128 213 aaPredicted RBP17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 DNM1Q05193 864 aaKnown RBP17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 STX1AQ16623 288 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 RAB11FIP4Q86YS3 637 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 UNC13BO14795 1591 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 CCDC152Q4G0S7 254 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 CATIPQ7Z7H3 387 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 RUFY1Q96T51 708 aa17.79■□□□□ 0.44
PCDHA3-202ENST00000532566 EIF4A1P60842 406 aaKnown RBP17.78■□□□□ 0.44
PCDHA3-202ENST00000532566 CNNM3Q8NE01 707 aa17.78■□□□□ 0.44
PCDHA3-202ENST00000532566 NGLY1Q96IV0 654 aa17.78■□□□□ 0.44
PCDHA3-202ENST00000532566 METTL22Q9BUU2 404 aaPredicted RBP17.78■□□□□ 0.44
PCDHA3-202ENST00000532566 RTL1A6NKG5 1358 aa17.78■□□□□ 0.44
PCDHA3-202ENST00000532566 KIF2AO00139 706 aaPredicted RBP17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 CCDC144CPQ8IYA2 1237 aa17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 HMGB2P26583 209 aaKnown RBP17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 RUFY3Q7L099 469 aa17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 ZSCAN29Q8IWY8 852 aaPredicted RBP17.77■□□□□ 0.44
PCDHA3-202ENST00000532566 SGSM2O43147 1006 aa17.77■□□□□ 0.43
PCDHA3-202ENST00000532566 SLC9C2Q5TAH2 1124 aa17.77■□□□□ 0.43
PCDHA3-202ENST00000532566 IL17REQ8NFR9 667 aa17.77■□□□□ 0.43
PCDHA3-202ENST00000532566 BMP2KQ9NSY1 1161 aaPredicted RBP17.77■□□□□ 0.43
PCDHA3-202ENST00000532566 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 PTPN14Q15678 1187 aa17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 ERCC4Q92889 916 aaPredicted RBP17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 ABCC3O15438 1527 aa17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 MAP3K4Q9Y6R4 1608 aa17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 ZHX3Q9H4I2 956 aa17.76■□□□□ 0.43
PCDHA3-202ENST00000532566 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 RNF113AO15541 343 aaKnown RBP17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 ZBTB43O43298 467 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 SYT1P21579 422 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 PLBD2Q8NHP8 589 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 SLC26A6Q9BXS9 759 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 BIN1O00499 593 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 KLHL10Q6JEL2 608 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 AK7Q96M32 723 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 DACT1Q9NYF0 836 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 CROCC2H7BZ55 1655 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 NEMFO60524 1076 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 SSBP05455 408 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 KLHL34Q8N239 644 aa17.75■□□□□ 0.43
PCDHA3-202ENST00000532566 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 SLC52A2Q9HAB3 445 aa17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 SEC63Q9UGP8 760 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 RRP9O43818 475 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 CPA1P15085 419 aa17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 DEF6Q9H4E7 631 aa17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 GSPT1P15170 499 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 LUC7LQ9NQ29 371 aaKnown RBP17.74■□□□□ 0.43
PCDHA3-202ENST00000532566 TOP1P11387 765 aaKnown RBP17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 CLCN1P35523 988 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 NLRP5P59047 1200 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 HSPA2P54652 639 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 WTAPQ15007 396 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 KCNG4Q8TDN1 519 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 KRT23Q9C075 422 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 TANGO6Q9C0B7 1094 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 EPB41L2O43491 1005 aaKnown RBP17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 PRC1O43663 620 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 CT47A1Q5JQC4 288 aaPredicted RBP17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 CNNM2Q9H8M5 875 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 PLEKHG1Q9ULL1 1385 aa17.73■□□□□ 0.43
PCDHA3-202ENST00000532566 DZIP3Q86Y13 1208 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 KLHDC4Q8TBB5 520 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 SUCLG2Q96I99 432 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 ALG1Q9BT22 464 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 CCDC194A0A1B0GVG4 234 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 ATP6V1AP38606 617 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 CCDC102BQ68D86 513 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 LDHCP07864 332 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 GSDMDP57764 484 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 TNNI3KQ59H18 835 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 KIF18AQ8NI77 898 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 RPGRQ92834 1020 aaKnown RBP17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 SNX14Q9Y5W7 946 aa17.72■□□□□ 0.43
PCDHA3-202ENST00000532566 FPGT-TNNI3KV9GXZ4 949 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms