RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 PRIM1P49642 420 aaKnown RBP28.22■■■□□ 2.11
SORL1-210ENST00000532451 EVA1CP58658 441 aa28.22■■■□□ 2.11
SORL1-210ENST00000532451 CCDC191Q8NCU4 936 aa28.22■■■□□ 2.11
SORL1-210ENST00000532451 HAUS7Q99871 368 aa28.21■■■□□ 2.11
SORL1-210ENST00000532451 ZBTB3Q9H5J0 574 aa28.21■■■□□ 2.11
SORL1-210ENST00000532451 TAF5LO75529 589 aa28.21■■■□□ 2.11
SORL1-210ENST00000532451 LRSAM1Q6UWE0 723 aa28.21■■■□□ 2.11
SORL1-210ENST00000532451 ANP32BQ92688 251 aaKnown RBP28.21■■■□□ 2.11
SORL1-210ENST00000532451 HMG20BQ9P0W2 317 aa28.21■■■□□ 2.11
SORL1-210ENST00000532451 ME3Q16798 604 aa28.2■■■□□ 2.11
SORL1-210ENST00000532451 PPP1R9BQ96SB3 815 aa28.2■■■□□ 2.11
SORL1-210ENST00000532451 RBSNQ9H1K0 784 aa28.2■■■□□ 2.11
SORL1-210ENST00000532451 GJB2P29033 226 aa28.2■■■□□ 2.1
SORL1-210ENST00000532451 ATG9AQ7Z3C6 839 aa28.2■■■□□ 2.1
SORL1-210ENST00000532451 USP48Q86UV5 1035 aa28.2■■■□□ 2.1
SORL1-210ENST00000532451 TMEM87AQ8NBN3 555 aa28.2■■■□□ 2.1
SORL1-210ENST00000532451 TRIM44Q96DX7 344 aaPredicted RBP28.2■■■□□ 2.1
SORL1-210ENST00000532451 DNAJC2Q99543 621 aaKnown RBP28.2■■■□□ 2.1
SORL1-210ENST00000532451 GDPD2Q9HCC8 539 aa28.2■■■□□ 2.1
SORL1-210ENST00000532451 ST3GAL1Q11201 340 aa28.19■■■□□ 2.1
SORL1-210ENST00000532451 SYCE3A1L190 88 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 TSGA10IPQ3SY00 556 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 BLOC1S2Q6QNY1 142 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 NDUFB9Q9Y6M9 179 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 F13A1P00488 732 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 GPR108Q9NPR9 543 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 TPCN1Q9ULQ1 816 aa28.18■■■□□ 2.1
SORL1-210ENST00000532451 USPL1Q5W0Q7 1092 aa28.17■■■□□ 2.1
SORL1-210ENST00000532451 TOGARAM1Q9Y4F4 1720 aa28.17■■■□□ 2.1
SORL1-210ENST00000532451 GADD45BO75293 160 aaPredicted RBP28.17■■■□□ 2.1
SORL1-210ENST00000532451 SYAP1Q96A49 352 aaPredicted RBP28.17■■■□□ 2.1
SORL1-210ENST00000532451 ALDH8A1Q9H2A2 487 aaPredicted RBP28.17■■■□□ 2.1
SORL1-210ENST00000532451 TMOD3Q9NYL9 352 aa28.17■■■□□ 2.1
SORL1-210ENST00000532451 ZNF609O15014 1411 aa28.17■■■□□ 2.1
SORL1-210ENST00000532451 RPS6KB1P23443 525 aa28.16■■■□□ 2.1
SORL1-210ENST00000532451 IL15P40933 162 aaPredicted RBP28.16■■■□□ 2.1
SORL1-210ENST00000532451 ANKRD1Q15327 319 aa28.16■■■□□ 2.1
SORL1-210ENST00000532451 ATP6V1DQ9Y5K8 247 aa28.16■■■□□ 2.1
SORL1-210ENST00000532451 TAF6LQ9Y6J9 622 aa28.16■■■□□ 2.1
SORL1-210ENST00000532451 COL9A3Q14050 684 aaPredicted RBP28.16■■■□□ 2.1
SORL1-210ENST00000532451 NHSL1Q5SYE7 1610 aa28.14■■■□□ 2.1
SORL1-210ENST00000532451 NECAB1Q8N987 351 aa28.14■■■□□ 2.1
SORL1-210ENST00000532451 CNPY2Q9Y2B0 182 aa28.14■■■□□ 2.1
SORL1-210ENST00000532451 DDX46Q7L014 1031 aaKnown RBP28.14■■■□□ 2.09
SORL1-210ENST00000532451 KBTBD3Q8NAB2 608 aa28.14■■■□□ 2.09
SORL1-210ENST00000532451 ISCA1Q9BUE6 129 aa28.14■■■□□ 2.09
SORL1-210ENST00000532451 MTMR6Q9Y217 621 aa28.14■■■□□ 2.09
SORL1-210ENST00000532451 CLCN1P35523 988 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 KRT32Q14532 448 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 MCMDC2Q4G0Z9 681 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 NEUROD6Q96NK8 337 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 ATG3Q9NT62 314 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 ESPNB1AK53 854 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 EYA2O00167 538 aa28.13■■■□□ 2.09
SORL1-210ENST00000532451 CCDC9Q9Y3X0 531 aaKnown RBP28.11■■■□□ 2.09
SORL1-210ENST00000532451 U3KPZ7 1027 aaPredicted RBP28.11■■■□□ 2.09
SORL1-210ENST00000532451 PALLDQ8WX93 1383 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 CIAO1O76071 339 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 CHGBP05060 677 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 TCIRG1Q13488 830 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 TOB2Q14106 344 aaPredicted RBP28.11■■■□□ 2.09
SORL1-210ENST00000532451 LRRC24Q50LG9 513 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 CCDC129Q6ZRS4 1044 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 TCEANC2Q96MN5 208 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 SEC62Q99442 399 aaKnown RBP28.11■■■□□ 2.09
SORL1-210ENST00000532451 TCHHQ07283 1943 aa28.11■■■□□ 2.09
SORL1-210ENST00000532451 SH3TC1Q8TE82 1336 aa28.1■■■□□ 2.09
SORL1-210ENST00000532451 ZNF594Q96JF6 807 aaPredicted RBP28.1■■■□□ 2.09
SORL1-210ENST00000532451 TIMM10P62072 90 aa28.1■■■□□ 2.09
SORL1-210ENST00000532451 TEX13AQ9BXU3 409 aaPredicted RBP28.09■■■□□ 2.09
SORL1-210ENST00000532451 PAG1Q9NWQ8 432 aa28.09■■■□□ 2.09
SORL1-210ENST00000532451 DTNBO60941 627 aa28.09■■■□□ 2.09
SORL1-210ENST00000532451 PHF14O94880 888 aa28.09■■■□□ 2.09
SORL1-210ENST00000532451 VSIG10Q8N0Z9 540 aa28.09■■■□□ 2.09
SORL1-210ENST00000532451 PDIA4P13667 645 aaKnown RBP28.08■■■□□ 2.09
SORL1-210ENST00000532451 TICAM2Q86XR7 235 aa28.08■■■□□ 2.09
SORL1-210ENST00000532451 PIGBQ92521 554 aa28.08■■■□□ 2.09
SORL1-210ENST00000532451 ASAP1Q9ULH1 1129 aa28.08■■■□□ 2.09
SORL1-210ENST00000532451 GOLIM4O00461 696 aa28.07■■■□□ 2.08
SORL1-210ENST00000532451 TRIM28Q13263 835 aaKnown RBP28.07■■■□□ 2.08
SORL1-210ENST00000532451 DNAJC10Q8IXB1 793 aa28.07■■■□□ 2.08
SORL1-210ENST00000532451 UBE2HP62256 183 aa28.07■■■□□ 2.08
SORL1-210ENST00000532451 NEK1Q96PY6 1258 aa28.07■■■□□ 2.08
SORL1-210ENST00000532451 ZNF330Q9Y3S2 320 aaPredicted RBP28.07■■■□□ 2.08
SORL1-210ENST00000532451 VPS37CA5D8V6 355 aaPredicted RBP28.06■■■□□ 2.08
SORL1-210ENST00000532451 KDM4FA0A1W2PPD8 638 aa28.06■■■□□ 2.08
SORL1-210ENST00000532451 KIF6Q6ZMV9 814 aa28.06■■■□□ 2.08
SORL1-210ENST00000532451 PUS3Q9BZE2 481 aaKnown RBP28.06■■■□□ 2.08
SORL1-210ENST00000532451 TSPY26PQ9H489 355 aa28.06■■■□□ 2.08
SORL1-210ENST00000532451 HELLSQ9NRZ9 838 aa28.06■■■□□ 2.08
SORL1-210ENST00000532451 A0A1B0GUL7 405 aa28.05■■■□□ 2.08
SORL1-210ENST00000532451 FIBPO43427 364 aa28.05■■■□□ 2.08
SORL1-210ENST00000532451 CSPP1Q1MSJ5 1256 aa28.05■■■□□ 2.08
SORL1-210ENST00000532451 LARP1BQ659C4 914 aaKnown RBP28.05■■■□□ 2.08
SORL1-210ENST00000532451 BTG4Q9NY30 223 aa28.05■■■□□ 2.08
SORL1-210ENST00000532451 CYP21A2P08686 494 aa28.04■■■□□ 2.08
SORL1-210ENST00000532451 CCDC57Q2TAC2 916 aa28.04■■■□□ 2.08
SORL1-210ENST00000532451 PDCP20941 246 aa28.04■■■□□ 2.08
SORL1-210ENST00000532451 PDLIM2Q96JY6 352 aa28.04■■■□□ 2.08
SORL1-210ENST00000532451 PCCAP05165 728 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms