RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 BNIP3LO60238 219 aa12.41□□□□□ -0.42
KNL1-209ENST00000532347 TNP2Q05952 138 aa12.41□□□□□ -0.42
KNL1-209ENST00000532347 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
KNL1-209ENST00000532347 CITED4Q96RK1 184 aa12.41□□□□□ -0.42
KNL1-209ENST00000532347 NDFIP2Q9NV92 336 aa12.41□□□□□ -0.42
KNL1-209ENST00000532347 GLI2P10070 1586 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 MAPTP10636 758 aaKnown RBP12.4□□□□□ -0.42
KNL1-209ENST00000532347 EPB42P16452 691 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 TMC7Q7Z402 723 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 GJD3Q8N144 294 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 CMTR1Q8N1G2 835 aaKnown RBP12.4□□□□□ -0.42
KNL1-209ENST00000532347 VWA5B2Q8N398 1253 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 RGS22Q8NE09 1264 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 ABHD17AQ96GS6 310 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 NXF1Q9UBU9 619 aaKnown RBP12.4□□□□□ -0.42
KNL1-209ENST00000532347 HCN2Q9UL51 889 aa12.4□□□□□ -0.42
KNL1-209ENST00000532347 PCSK2P16519 638 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 USP5P45974 858 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 SFSWAPQ12872 951 aaKnown RBP12.39□□□□□ -0.43
KNL1-209ENST00000532347 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 ZSCAN29Q8IWY8 852 aaPredicted RBP12.39□□□□□ -0.43
KNL1-209ENST00000532347 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 NANOS1Q8WY41 292 aaKnown RBP12.39□□□□□ -0.43
KNL1-209ENST00000532347 KCNMB2Q9Y691 235 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 PLB1Q6P1J6 1458 aa12.39□□□□□ -0.43
KNL1-209ENST00000532347 ANKRD33BA6NCL7 494 aa12.38□□□□□ -0.43
KNL1-209ENST00000532347 VEGFBP49765 207 aa12.38□□□□□ -0.43
KNL1-209ENST00000532347 KCNQ4P56696 695 aa12.38□□□□□ -0.43
KNL1-209ENST00000532347 TRIP4Q15650 581 aaPredicted RBP12.38□□□□□ -0.43
KNL1-209ENST00000532347 FAM129BQ96TA1 746 aa12.38□□□□□ -0.43
KNL1-209ENST00000532347 GGNBP2Q9H3C7 697 aa12.38□□□□□ -0.43
KNL1-209ENST00000532347 GPR25O00155 361 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 SV2AQ7L0J3 742 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 STRN4Q9NRL3 753 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 KCNH4Q9UQ05 1017 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 CARMIL2Q6F5E8 1435 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 KIF27Q86VH2 1401 aa12.37□□□□□ -0.43
KNL1-209ENST00000532347 IGHA2P01877 340 aa12.36□□□□□ -0.43
KNL1-209ENST00000532347 RPLP1P05386 114 aaKnown RBP12.36□□□□□ -0.43
KNL1-209ENST00000532347 PDE3BQ13370 1112 aa12.36□□□□□ -0.43
KNL1-209ENST00000532347 LAMC2Q13753 1193 aa12.36□□□□□ -0.43
KNL1-209ENST00000532347 C8orf34Q49A92 452 aa12.36□□□□□ -0.43
KNL1-209ENST00000532347 ATXN7L1Q9ULK2 861 aaPredicted RBP12.36□□□□□ -0.43
KNL1-209ENST00000532347 A6NHS1 94 aa12.35□□□□□ -0.43
KNL1-209ENST00000532347 ERCC3P19447 782 aa12.35□□□□□ -0.43
KNL1-209ENST00000532347 FOXR1Q6PIV2 292 aa12.35□□□□□ -0.43
KNL1-209ENST00000532347 TTC16Q8NEE8 873 aa12.35□□□□□ -0.43
KNL1-209ENST00000532347 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
KNL1-209ENST00000532347 UBAP1LF5GYI3 381 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 GPR182O15218 404 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 GRIN2CQ14957 1233 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 DMRTB1Q96MA1 342 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 CFHR5Q9BXR6 569 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 PHF24Q9UPV7 400 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 FNDC3AQ9Y2H6 1198 aaKnown RBP12.34□□□□□ -0.43
KNL1-209ENST00000532347 PTPRGP23470 1445 aa12.34□□□□□ -0.43
KNL1-209ENST00000532347 IGF1RP08069 1367 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 TNIKQ9UKE5 1360 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 XYLBO75191 536 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 CD33P20138 364 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 EHHADHQ08426 723 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 NPAS4Q8IUM7 802 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 NPAS3Q8IXF0 933 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 C11orf16Q9NQ32 467 aa12.33□□□□□ -0.44
KNL1-209ENST00000532347 H3BM21 787 aa12.32□□□□□ -0.44
KNL1-209ENST00000532347 TREHO43280 583 aa12.32□□□□□ -0.44
KNL1-209ENST00000532347 EGFRP00533 1210 aa12.32□□□□□ -0.44
KNL1-209ENST00000532347 FGFR3P22607 806 aa12.32□□□□□ -0.44
KNL1-209ENST00000532347 FOXD4L4Q8WXT5 416 aaPredicted RBP12.32□□□□□ -0.44
KNL1-209ENST00000532347 TEX14Q8IWB6 1497 aa12.32□□□□□ -0.44
KNL1-209ENST00000532347 PDE12Q6L8Q7 609 aaKnown RBP12.3□□□□□ -0.44
KNL1-209ENST00000532347 GSX2Q9BZM3 304 aa12.3□□□□□ -0.44
KNL1-209ENST00000532347 SPEM2Q0P670 501 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 CCINQ13939 588 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 DSC3Q14574 896 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 XKR5Q6UX68 686 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 ZNF438Q7Z4V0 828 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 ALKBH8Q96BT7 664 aaKnown RBP12.29□□□□□ -0.44
KNL1-209ENST00000532347 NIF3L1Q9GZT8 377 aa12.29□□□□□ -0.44
KNL1-209ENST00000532347 TERTO14746 1132 aaKnown RBP12.28□□□□□ -0.44
KNL1-209ENST00000532347 CTBSQ01459 385 aa12.28□□□□□ -0.44
KNL1-209ENST00000532347 FAM182BQ5T319 152 aa12.28□□□□□ -0.44
KNL1-209ENST00000532347 GPR161Q8N6U8 529 aaKnown RBP12.28□□□□□ -0.44
KNL1-209ENST00000532347 SLC30A3Q99726 388 aa12.28□□□□□ -0.44
KNL1-209ENST00000532347 ELP3Q9H9T3 547 aa12.28□□□□□ -0.44
KNL1-209ENST00000532347 ASXL2Q76L83 1435 aa12.28□□□□□ -0.44
KNL1-209ENST00000532347 KDM5BQ9UGL1 1544 aa12.27□□□□□ -0.44
KNL1-209ENST00000532347 IQGAP2Q13576 1575 aa12.27□□□□□ -0.44
KNL1-209ENST00000532347 PPRC1Q5VV67 1664 aaKnown RBP12.27□□□□□ -0.45
KNL1-209ENST00000532347 SASH3O75995 380 aa12.27□□□□□ -0.45
KNL1-209ENST00000532347 PLCB3Q01970 1234 aa12.27□□□□□ -0.45
KNL1-209ENST00000532347 KRT25Q7Z3Z0 450 aa12.27□□□□□ -0.45
KNL1-209ENST00000532347 NLRP13Q86W25 1043 aa12.27□□□□□ -0.45
KNL1-209ENST00000532347 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
KNL1-209ENST00000532347 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
KNL1-209ENST00000532347 VSIG8P0DPA2 414 aa12.26□□□□□ -0.45
KNL1-209ENST00000532347 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms