RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 PUM3Q15397 648 aaKnown RBP13.69□□□□□ -0.22
CSRP1-215ENST00000532313 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 A1BGP04217 495 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 DLGAP5Q15398 846 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 WWC3Q9ULE0 1092 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 PRR36Q9H6K5 1346 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 GNAQP50148 359 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 RPS8P62241 208 aaKnown RBP13.69□□□□□ -0.22
CSRP1-215ENST00000532313 DCAF15Q66K64 600 aa13.69□□□□□ -0.22
CSRP1-215ENST00000532313 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
CSRP1-215ENST00000532313 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 C22orf23Q9BZE7 217 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 BBOX1O75936 387 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 DNTTIP2Q5QJE6 756 aaKnown RBP13.68□□□□□ -0.22
CSRP1-215ENST00000532313 BARGINQ6ZT62 677 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 SULF1Q8IWU6 871 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 STK11IPQ8N1F8 1099 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 RAB34Q9BZG1 259 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 LAMC1P11047 1609 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 PIP4K2AP48426 406 aaPredicted RBP13.68□□□□□ -0.22
CSRP1-215ENST00000532313 CWC27Q6UX04 472 aaKnown RBP13.68□□□□□ -0.22
CSRP1-215ENST00000532313 BICD2Q8TD16 824 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 BIN2Q9UBW5 565 aaPredicted RBP13.68□□□□□ -0.22
CSRP1-215ENST00000532313 IGSF1Q8N6C5 1336 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 DDX11L8A8MPP1 907 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
CSRP1-215ENST00000532313 GOLIM4O00461 696 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 SERPINB2P05120 415 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.222e-7■■■□□ 14.8
CSRP1-215ENST00000532313 KRT23Q9C075 422 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 LGR6Q9HBX8 967 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
CSRP1-215ENST00000532313 CHL1O00533 1208 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 RPS6KA4O75676 772 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 USP48Q86UV5 1035 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 ZNF408Q9H9D4 720 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 BECN2A8MW95 431 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 ITGA6P23229 1130 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 CSADQ9Y600 493 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 GOLGA6L19H0YKK7 550 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 SCLT1Q96NL6 688 aa13.67□□□□□ -0.22
CSRP1-215ENST00000532313 TRIM27P14373 513 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 CEP131Q9UPN4 1083 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 MAP3K15Q6ZN16 1313 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 MAGEB6P1A0A0J9YX57 407 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 EPS15P42566 896 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 BRDTQ58F21 947 aaPredicted RBP13.66□□□□□ -0.22
CSRP1-215ENST00000532313 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 C8orf58Q8NAV2 365 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 ERVV-1B6SEH8 477 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 IPO7O95373 1038 aaKnown RBP13.66□□□□□ -0.22
CSRP1-215ENST00000532313 EIF4A1P60842 406 aaKnown RBP13.66□□□□□ -0.22
CSRP1-215ENST00000532313 CLEC4GQ6UXB4 293 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 FER1L4A9Z1Z3 1794 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 SKOR2Q2VWA4 1001 aaPredicted RBP13.66□□□□□ -0.22
CSRP1-215ENST00000532313 FAM89AQ96GI7 184 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 SPHKAPQ2M3C7 1700 aa13.66□□□□□ -0.22
CSRP1-215ENST00000532313 HCLS1P14317 486 aaPredicted RBP13.65□□□□□ -0.22
CSRP1-215ENST00000532313 PHAXQ9H814 394 aaKnown RBP13.65□□□□□ -0.22
CSRP1-215ENST00000532313 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 NCAPD2Q15021 1401 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 NPR1P16066 1061 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 SSFA2P28290 1259 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 MRPL50Q8N5N7 158 aaKnown RBP13.65□□□□□ -0.22
CSRP1-215ENST00000532313 ESR2Q92731 530 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 SLC12A7Q9Y666 1083 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 EYA2O00167 538 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 PDE4AP27815 886 aa13.65□□□□□ -0.22
CSRP1-215ENST00000532313 NEK4P51957 841 aa13.65□□□□□ -0.23
CSRP1-215ENST00000532313 RHPN1Q8TCX5 695 aa13.65□□□□□ -0.23
CSRP1-215ENST00000532313 IVNS1ABPQ9Y6Y0 642 aa13.65□□□□□ -0.23
CSRP1-215ENST00000532313 PPP1R12BO60237 982 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 BAG4O95429 457 aaKnown RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 TXNRD1Q16881 649 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 MADDQ8WXG6 1647 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 PICALMQ13492 652 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 AS3MTQ9HBK9 375 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 PCMTD1Q96MG8 357 aaPredicted RBP13.64□□□□□ -0.23
CSRP1-215ENST00000532313 ARHGEF10LQ9HCE6 1279 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
CSRP1-215ENST00000532313 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
CSRP1-215ENST00000532313 LPIN2Q92539 896 aa13.63□□□□□ -0.23
CSRP1-215ENST00000532313 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
CSRP1-215ENST00000532313 FBXO3Q9UK99 471 aa13.63□□□□□ -0.23
CSRP1-215ENST00000532313 DLC1Q96QB1 1528 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms