RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
NXF1-212ENST00000531872 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
NXF1-212ENST00000531872 RRP7AQ9Y3A4 280 aaKnown RBP10.4□□□□□ -0.74
NXF1-212ENST00000531872 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 H7C1D1 291 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 BBOX1O75936 387 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 RAD17O75943 681 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 DPP8Q6V1X1 898 aaPredicted RBP10.39□□□□□ -0.75
NXF1-212ENST00000531872 MPNDQ8N594 471 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 RNF186Q9NXI6 227 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
NXF1-212ENST00000531872 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
NXF1-212ENST00000531872 MYL6BP14649 208 aa10.38□□□□□ -0.75
NXF1-212ENST00000531872 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
NXF1-212ENST00000531872 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.756e-8■■■■□ 20.7
NXF1-212ENST00000531872 KIF23Q02241 960 aaPredicted RBP10.38□□□□□ -0.75
NXF1-212ENST00000531872 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
NXF1-212ENST00000531872 PNISRQ8TF01 805 aaKnown RBP10.38□□□□□ -0.75
NXF1-212ENST00000531872 DPF2Q92785 391 aa10.38□□□□□ -0.75
NXF1-212ENST00000531872 GBA2Q9HCG7 927 aaPredicted RBP10.38□□□□□ -0.75
NXF1-212ENST00000531872 KDM3BQ7LBC6 1761 aa10.38□□□□□ -0.75
NXF1-212ENST00000531872 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
NXF1-212ENST00000531872 TRPA1O75762 1119 aa10.37□□□□□ -0.75
NXF1-212ENST00000531872 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
NXF1-212ENST00000531872 CTU1Q7Z7A3 348 aaKnown RBP10.37□□□□□ -0.75
NXF1-212ENST00000531872 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
NXF1-212ENST00000531872 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
NXF1-212ENST00000531872 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
NXF1-212ENST00000531872 DUOX1Q9NRD9 1551 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 SLC10A3P09131 477 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 ZNF157P51786 506 aaPredicted RBP10.36□□□□□ -0.75
NXF1-212ENST00000531872 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
NXF1-212ENST00000531872 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 KRT26Q7Z3Y9 468 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
NXF1-212ENST00000531872 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 ANKRD36CQ5JPF3 1778 aa10.36□□□□□ -0.75
NXF1-212ENST00000531872 POLR2AP24928 1970 aaKnown RBP10.35□□□□□ -0.75
NXF1-212ENST00000531872 LAMB2P55268 1798 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 ADM5C9JUS6 153 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 PSMD14O00487 310 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 EGFRP00533 1210 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 GRAPQ13588 217 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 TBC1D10BQ4KMP7 808 aaPredicted RBP10.35□□□□□ -0.75
NXF1-212ENST00000531872 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
NXF1-212ENST00000531872 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
NXF1-212ENST00000531872 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
NXF1-212ENST00000531872 PDIA6Q15084 440 aa10.34□□□□□ -0.75
NXF1-212ENST00000531872 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
NXF1-212ENST00000531872 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
NXF1-212ENST00000531872 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
NXF1-212ENST00000531872 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
NXF1-212ENST00000531872 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
NXF1-212ENST00000531872 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
NXF1-212ENST00000531872 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
NXF1-212ENST00000531872 PPP2R1AP30153 589 aa10.33□□□□□ -0.76
NXF1-212ENST00000531872 PKN2Q16513 984 aaKnown RBP10.33□□□□□ -0.76
NXF1-212ENST00000531872 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
NXF1-212ENST00000531872 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
NXF1-212ENST00000531872 RTL9Q8NET4 1388 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 RASAL3Q86YV0 1011 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
NXF1-212ENST00000531872 DBNDD1Q9H9R9 158 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
NXF1-212ENST00000531872 TAF1P21675 1872 aa10.32□□□□□ -0.76
NXF1-212ENST00000531872 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 KIF4BQ2VIQ3 1234 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
NXF1-212ENST00000531872 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 CDCA5Q96FF9 252 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 POLLQ9UGP5 575 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
NXF1-212ENST00000531872 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
NXF1-212ENST00000531872 ECE2O60344 883 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 VIL1P09327 827 aaKnown RBP10.3□□□□□ -0.76
NXF1-212ENST00000531872 KCNA4P22459 653 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 FKBP1BP68106 108 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 NOM1Q5C9Z4 860 aaKnown RBP10.3□□□□□ -0.76
NXF1-212ENST00000531872 ZNF296Q8WUU4 475 aaPredicted RBP10.3□□□□□ -0.76
NXF1-212ENST00000531872 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
NXF1-212ENST00000531872 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
NXF1-212ENST00000531872 ASTN2O75129 1339 aaPredicted RBP10.3□□□□□ -0.76
NXF1-212ENST00000531872 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 ANXA1P04083 346 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 EIF2S2P20042 333 aaKnown RBP10.29□□□□□ -0.76
NXF1-212ENST00000531872 GPSM2P81274 684 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 SF3B3Q15393 1217 aaKnown RBP10.29□□□□□ -0.76
NXF1-212ENST00000531872 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
NXF1-212ENST00000531872 COPS6Q7L5N1 327 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms