RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 UVSSAQ2YD98 709 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
VPS26B-206ENST00000531741 NAP1L5Q96NT1 182 aaPredicted RBP20.12■□□□□ 0.81
VPS26B-206ENST00000531741 TFCP2Q12800 502 aa20.11■□□□□ 0.81
VPS26B-206ENST00000531741 KRT32Q14532 448 aa20.11■□□□□ 0.81
VPS26B-206ENST00000531741 NUP188Q5SRE5 1749 aa20.11■□□□□ 0.81
VPS26B-206ENST00000531741 A0A087WZG4 1122 aa20.11■□□□□ 0.81
VPS26B-206ENST00000531741 PDCP20941 246 aa20.11■□□□□ 0.81
VPS26B-206ENST00000531741 ZNF500O60304 480 aaPredicted RBP20.1■□□□□ 0.81
VPS26B-206ENST00000531741 ZNF589Q86UQ0 364 aaPredicted RBP20.1■□□□□ 0.81
VPS26B-206ENST00000531741 HAUS7Q99871 368 aa20.1■□□□□ 0.81
VPS26B-206ENST00000531741 CCDC39Q9UFE4 941 aa20.1■□□□□ 0.81
VPS26B-206ENST00000531741 H7C1W4 665 aa20.09■□□□□ 0.81
VPS26B-206ENST00000531741 PAPPAQ13219 1627 aa20.09■□□□□ 0.81
VPS26B-206ENST00000531741 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
VPS26B-206ENST00000531741 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
VPS26B-206ENST00000531741 ERVV-2B6SEH9 535 aa20.08■□□□□ 0.81
VPS26B-206ENST00000531741 GPR108Q9NPR9 543 aa20.08■□□□□ 0.81
VPS26B-206ENST00000531741 TOB2Q14106 344 aaPredicted RBP20.07■□□□□ 0.8
VPS26B-206ENST00000531741 RNF214Q8ND24 703 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.07■□□□□ 0.8
VPS26B-206ENST00000531741 ZKSCAN5Q9Y2L8 839 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 ATP5J2-PTCD1G3V325 749 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 PTCD1O75127 700 aaKnown RBP20.07■□□□□ 0.8
VPS26B-206ENST00000531741 OFD1O75665 1012 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 PIP4K2AP48426 406 aaPredicted RBP20.07■□□□□ 0.8
VPS26B-206ENST00000531741 FOXO4P98177 505 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 NECAB1Q8N987 351 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
VPS26B-206ENST00000531741 WDR17Q8IZU2 1322 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 TJP1Q07157 1748 aa20.07■□□□□ 0.8
VPS26B-206ENST00000531741 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 FIBPO43427 364 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 DNM1Q05193 864 aaKnown RBP20.06■□□□□ 0.8
VPS26B-206ENST00000531741 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
VPS26B-206ENST00000531741 NBPF14Q5TI25 921 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 LARP1BQ659C4 914 aaKnown RBP20.06■□□□□ 0.8
VPS26B-206ENST00000531741 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
VPS26B-206ENST00000531741 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 ZNF609O15014 1411 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 KCPQ6ZWJ8 1503 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 ELP1O95163 1332 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 PALLDQ8WX93 1383 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 EDC3Q96F86 508 aaKnown RBP20.06■□□□□ 0.8
VPS26B-206ENST00000531741 DBNDD2Q9BQY9 259 aa20.06■□□□□ 0.8
VPS26B-206ENST00000531741 SH3TC1Q8TE82 1336 aa20.05■□□□□ 0.8
VPS26B-206ENST00000531741 MCMDC2Q4G0Z9 681 aa20.05■□□□□ 0.8
VPS26B-206ENST00000531741 LMBR1LQ6UX01 489 aa20.05■□□□□ 0.8
VPS26B-206ENST00000531741 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
VPS26B-206ENST00000531741 DDX54Q8TDD1 881 aaKnown RBP20.05■□□□□ 0.8
VPS26B-206ENST00000531741 JARID2Q92833 1246 aaPredicted RBP20.05■□□□□ 0.8
VPS26B-206ENST00000531741 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
VPS26B-206ENST00000531741 ZCRB1Q8TBF4 217 aaKnown RBP20.04■□□□□ 0.8
VPS26B-206ENST00000531741 CWC25Q9NXE8 425 aaPredicted RBP20.04■□□□□ 0.8
VPS26B-206ENST00000531741 TAF6LQ9Y6J9 622 aa20.04■□□□□ 0.8
VPS26B-206ENST00000531741 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
VPS26B-206ENST00000531741 TERF1P54274 439 aa20.04■□□□□ 0.8
VPS26B-206ENST00000531741 KRT85P78386 507 aa20.04■□□□□ 0.8
VPS26B-206ENST00000531741 COL9A3Q14050 684 aaPredicted RBP20.04■□□□□ 0.8
VPS26B-206ENST00000531741 FUCA2Q9BTY2 467 aa20.04■□□□□ 0.8
VPS26B-206ENST00000531741 ATG3Q9NT62 314 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 XIRP1Q702N8 1843 aaKnown RBP20.03■□□□□ 0.8
VPS26B-206ENST00000531741 TNS2Q63HR2 1409 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 SPEF2Q9C093 1822 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 ATG9AQ7Z3C6 839 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 CCDC191Q8NCU4 936 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 NEK1Q96PY6 1258 aa20.03■□□□□ 0.8
VPS26B-206ENST00000531741 TPM2P07951 284 aa20.02■□□□□ 0.8
VPS26B-206ENST00000531741 IL15P40933 162 aaPredicted RBP20.02■□□□□ 0.8
VPS26B-206ENST00000531741 COL5A2P05997 1499 aaPredicted RBP20.02■□□□□ 0.8
VPS26B-206ENST00000531741 CDC37L1Q7L3B6 337 aa20.01■□□□□ 0.79
VPS26B-206ENST00000531741 CIAO1O76071 339 aa20.01■□□□□ 0.79
VPS26B-206ENST00000531741 DNAJC2Q99543 621 aaKnown RBP20.01■□□□□ 0.79
VPS26B-206ENST00000531741 HELLSQ9NRZ9 838 aa20.01■□□□□ 0.79
VPS26B-206ENST00000531741 SHANK3Q9BYB0 1731 aa20■□□□□ 0.79
VPS26B-206ENST00000531741 BRINP3Q76B58 766 aa20■□□□□ 0.79
VPS26B-206ENST00000531741 GTF3C6Q969F1 213 aa20■□□□□ 0.79
VPS26B-206ENST00000531741 HMGB1P09429 215 aaKnown RBP19.99■□□□□ 0.79
VPS26B-206ENST00000531741 TTLL7Q6ZT98 887 aa19.99■□□□□ 0.79
VPS26B-206ENST00000531741 TCEANC2Q96MN5 208 aa19.99■□□□□ 0.79
VPS26B-206ENST00000531741 SCAND2PQ9GZW5 306 aaPredicted RBP19.99■□□□□ 0.79
VPS26B-206ENST00000531741 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
VPS26B-206ENST00000531741 CYP21A2P08686 494 aa19.99■□□□□ 0.79
VPS26B-206ENST00000531741 DSCC1Q9BVC3 393 aa19.99■□□□□ 0.79
VPS26B-206ENST00000531741 TOM1L2Q6ZVM7 507 aa19.98■□□□□ 0.79
VPS26B-206ENST00000531741 TTC6Q86TZ1 520 aa19.98■□□□□ 0.79
VPS26B-206ENST00000531741 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.98■□□□□ 0.79
VPS26B-206ENST00000531741 CARD10Q9BWT7 1032 aa19.98■□□□□ 0.79
VPS26B-206ENST00000531741 SOS2Q07890 1332 aaPredicted RBP19.98■□□□□ 0.79
VPS26B-206ENST00000531741 EYA2O00167 538 aa19.98■□□□□ 0.79
VPS26B-206ENST00000531741 DDX46Q7L014 1031 aaKnown RBP19.98■□□□□ 0.79
VPS26B-206ENST00000531741 PAG1Q9NWQ8 432 aa19.98■□□□□ 0.79
VPS26B-206ENST00000531741 HCLS1P14317 486 aaPredicted RBP19.97■□□□□ 0.79
VPS26B-206ENST00000531741 IL2RBP14784 551 aa19.97■□□□□ 0.79
VPS26B-206ENST00000531741 SEC62Q99442 399 aaKnown RBP19.97■□□□□ 0.79
VPS26B-206ENST00000531741 FBXO3Q9UK99 471 aa19.97■□□□□ 0.79
VPS26B-206ENST00000531741 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
VPS26B-206ENST00000531741 ABCA3Q99758 1704 aa19.97■□□□□ 0.79
VPS26B-206ENST00000531741 ZMYM1Q5SVZ6 1142 aa19.96■□□□□ 0.79
VPS26B-206ENST00000531741 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms