RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 GTF3C3Q9Y5Q9 886 aa22.01■■□□□ 1.11
CTSB-222ENST00000531551 SF3B3Q15393 1217 aaKnown RBP22■■□□□ 1.11
CTSB-222ENST00000531551 CCDC57Q2TAC2 916 aa22■■□□□ 1.11
CTSB-222ENST00000531551 ERICH6BQ5W0A0 696 aa22■■□□□ 1.11
CTSB-222ENST00000531551 SIRT2Q8IXJ6 389 aa22■■□□□ 1.11
CTSB-222ENST00000531551 RPGRQ92834 1020 aaKnown RBP22■■□□□ 1.11
CTSB-222ENST00000531551 NRXN2Q9P2S2 1712 aa21.99■■□□□ 1.11
CTSB-222ENST00000531551 ITGA6P23229 1130 aa21.99■■□□□ 1.11
CTSB-222ENST00000531551 IFIT5Q13325 482 aaKnown RBP21.99■■□□□ 1.11
CTSB-222ENST00000531551 HMMRO75330 724 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 MTX1Q13505 466 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 TAF7LQ5H9L4 462 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 SEC31BQ9NQW1 1179 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
CTSB-222ENST00000531551 ANKRD18BA2A2Z9 1011 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 DDX46Q7L014 1031 aaKnown RBP21.98■■□□□ 1.11
CTSB-222ENST00000531551 C2CD5Q86YS7 1000 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 KLHDC4Q8TBB5 520 aa21.98■■□□□ 1.11
CTSB-222ENST00000531551 ZNF594Q96JF6 807 aaPredicted RBP21.97■■□□□ 1.11
CTSB-222ENST00000531551 RIC1Q4ADV7 1423 aa21.97■■□□□ 1.11
CTSB-222ENST00000531551 TNRC6CQ9HCJ0 1690 aaKnown RBP21.97■■□□□ 1.11
CTSB-222ENST00000531551 H0YIN7 160 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 CHRNA5P30532 468 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 C10orf71Q711Q0 1435 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 CCDC136Q96JN2 1154 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 CRY2Q49AN0 593 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 SSH3Q8TE77 659 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 ZNF622Q969S3 477 aaKnown RBP eCLIP21.96■■□□□ 1.11
CTSB-222ENST00000531551 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
CTSB-222ENST00000531551 PA2G4Q9UQ80 394 aaKnown RBP21.96■■□□□ 1.11
CTSB-222ENST00000531551 KLRG2A4D1S0 409 aaPredicted RBP21.95■■□□□ 1.1
CTSB-222ENST00000531551 POLA2Q14181 598 aa21.95■■□□□ 1.1
CTSB-222ENST00000531551 RBM17Q96I25 401 aaKnown RBP21.95■■□□□ 1.1
CTSB-222ENST00000531551 SIL1Q9H173 461 aa21.95■■□□□ 1.1
CTSB-222ENST00000531551 RWDD1Q9H446 243 aaPredicted RBP21.95■■□□□ 1.1
CTSB-222ENST00000531551 SRGNP10124 158 aa21.94■■□□□ 1.1
CTSB-222ENST00000531551 B4GALNT3Q6L9W6 998 aa21.94■■□□□ 1.1
CTSB-222ENST00000531551 LAMB2P55268 1798 aa21.94■■□□□ 1.1
CTSB-222ENST00000531551 IGHDP01880 384 aa21.94■■□□□ 1.1
CTSB-222ENST00000531551 RFX5P48382 616 aaPredicted RBP21.94■■□□□ 1.1
CTSB-222ENST00000531551 CDC5LQ99459 802 aaKnown RBP21.94■■□□□ 1.1
CTSB-222ENST00000531551 SURF6O75683 361 aaKnown RBP21.93■■□□□ 1.1
CTSB-222ENST00000531551 NPR1P16066 1061 aa21.93■■□□□ 1.1
CTSB-222ENST00000531551 PTPN12Q05209 780 aaKnown RBP21.93■■□□□ 1.1
CTSB-222ENST00000531551 CELF1Q92879 486 aaKnown RBP21.93■■□□□ 1.1
CTSB-222ENST00000531551 MASTLQ96GX5 879 aa21.93■■□□□ 1.1
CTSB-222ENST00000531551 SRCAPQ6ZRS2 3230 aa21.93■■□□□ 1.1
CTSB-222ENST00000531551 A0A0G2JLW4 131 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 IGHMBP2P38935 993 aaKnown RBP21.92■■□□□ 1.1
CTSB-222ENST00000531551 HDAC1Q13547 482 aaPredicted RBP21.92■■□□□ 1.1
CTSB-222ENST00000531551 ANKRD18AQ8IVF6 992 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 RTL9Q8NET4 1388 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 MPHOSPH8Q99549 860 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 PDZRN3Q9UPQ7 1066 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 EXOC6BQ9Y2D4 811 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
CTSB-222ENST00000531551 APBB1O00213 710 aa21.91■■□□□ 1.1
CTSB-222ENST00000531551 DPEP1P16444 411 aa21.91■■□□□ 1.1
CTSB-222ENST00000531551 OS9Q13438 667 aaPredicted RBP21.91■■□□□ 1.1
CTSB-222ENST00000531551 LDHAL6AQ6ZMR3 332 aa21.91■■□□□ 1.1
CTSB-222ENST00000531551 ANKRD31Q8N7Z5 1873 aa21.91■■□□□ 1.1
CTSB-222ENST00000531551 TGFB2P61812 414 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 GRAPQ13588 217 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 GRAPLQ8TC17 118 aaPredicted RBP21.9■■□□□ 1.1
CTSB-222ENST00000531551 BCL11AQ9H165 835 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 COPRSQ9NQ92 184 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 CNNM1Q9NRU3 951 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 MYH3P11055 1940 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 HOXA10P31260 410 aaPredicted RBP21.9■■□□□ 1.1
CTSB-222ENST00000531551 RPS8P62241 208 aaKnown RBP21.9■■□□□ 1.1
CTSB-222ENST00000531551 G3BP1Q13283 466 aaKnown RBP eCLIP21.9■■□□□ 1.1
CTSB-222ENST00000531551 PUS3Q9BZE2 481 aaKnown RBP21.9■■□□□ 1.1
CTSB-222ENST00000531551 WWC3Q9ULE0 1092 aa21.9■■□□□ 1.1
CTSB-222ENST00000531551 ALDH1B1P30837 517 aa21.89■■□□□ 1.09
CTSB-222ENST00000531551 CRAMP1Q96RY5 1269 aa21.89■■□□□ 1.09
CTSB-222ENST00000531551 FHDC1Q9C0D6 1143 aaPredicted RBP21.89■■□□□ 1.09
CTSB-222ENST00000531551 LRRC24Q50LG9 513 aa21.88■■□□□ 1.09
CTSB-222ENST00000531551 STYK1Q6J9G0 422 aa21.88■■□□□ 1.09
CTSB-222ENST00000531551 EYA2O00167 538 aa21.87■■□□□ 1.09
CTSB-222ENST00000531551 DCTPP1Q9H773 170 aa21.87■■□□□ 1.09
CTSB-222ENST00000531551 NLGN2Q8NFZ4 835 aa21.86■■□□□ 1.09
CTSB-222ENST00000531551 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
CTSB-222ENST00000531551 PPEF1O14829 653 aaPredicted RBP21.86■■□□□ 1.09
CTSB-222ENST00000531551 BBOX1O75936 387 aa21.86■■□□□ 1.09
CTSB-222ENST00000531551 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
CTSB-222ENST00000531551 NOP58Q9Y2X3 529 aaKnown RBP21.86■■□□□ 1.09
CTSB-222ENST00000531551 COL4A1P02462 1669 aa21.85■■□□□ 1.09
CTSB-222ENST00000531551 KCNA3P22001 575 aa21.85■■□□□ 1.09
CTSB-222ENST00000531551 HSP90AB4PQ58FF6 505 aa21.85■■□□□ 1.09
CTSB-222ENST00000531551 GCC1Q96CN9 775 aa21.85■■□□□ 1.09
CTSB-222ENST00000531551 BSDC1Q9NW68 430 aaPredicted RBP21.85■■□□□ 1.09
CTSB-222ENST00000531551 COL11A2P13942 1736 aaPredicted RBP21.84■■□□□ 1.09
CTSB-222ENST00000531551 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
CTSB-222ENST00000531551 PIM2Q9P1W9 311 aa21.84■■□□□ 1.09
CTSB-222ENST00000531551 IL15P40933 162 aaPredicted RBP21.83■■□□□ 1.09
CTSB-222ENST00000531551 METTL24Q5JXM2 366 aa21.83■■□□□ 1.09
CTSB-222ENST00000531551 ATG9AQ7Z3C6 839 aa21.83■■□□□ 1.09
CTSB-222ENST00000531551 SLC51AQ86UW1 340 aa21.83■■□□□ 1.09
CTSB-222ENST00000531551 TTLL6Q8N841 843 aa21.83■■□□□ 1.09
CTSB-222ENST00000531551 GOLGB1Q14789 3259 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms