RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FAM35AQ86V20 835 aa8.42□□□□□ -1.06
USP47-211ENST00000531513 FAM196BA6NMK8 535 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 KRT25Q7Z3Z0 450 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 KRTAP9-9Q9BYP9 154 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 KRTAP9-4Q9BYQ2 154 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 ZFATQ9P243 1243 aa8.41□□□□□ -1.06
USP47-211ENST00000531513 MAP3K6O95382 1288 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 DGKZQ13574 1117 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 GRIK5Q16478 980 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 ARTNQ5T4W7 220 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 CALR3Q96L12 384 aaKnown RBP8.4□□□□□ -1.06
USP47-211ENST00000531513 LPIN3Q9BQK8 851 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 QTRT2Q9H974 415 aaKnown RBP8.4□□□□□ -1.06
USP47-211ENST00000531513 ZFP64Q9NPA5 681 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 USP21Q9UK80 565 aa8.4□□□□□ -1.06
USP47-211ENST00000531513 ARSDP51689 593 aa8.39□□□□□ -1.07
USP47-211ENST00000531513 PLAURQ03405 335 aa8.39□□□□□ -1.07
USP47-211ENST00000531513 MSL1Q68DK7 614 aa8.39□□□□□ -1.07
USP47-211ENST00000531513 DHX32Q7L7V1 743 aaKnown RBP8.39□□□□□ -1.07
USP47-211ENST00000531513 TP53INP1Q96A56 240 aa8.39□□□□□ -1.07
USP47-211ENST00000531513 SSBP4Q9BWG4 385 aaPredicted RBP8.39□□□□□ -1.07
USP47-211ENST00000531513 ZBTB42B2RXF5 422 aa8.38□□□□□ -1.07
USP47-211ENST00000531513 SUPT5HO00267 1087 aaKnown RBP8.38□□□□□ -1.07
USP47-211ENST00000531513 MLLT1Q03111 559 aaPredicted RBP8.38□□□□□ -1.07
USP47-211ENST00000531513 PCSK7Q16549 785 aa8.38□□□□□ -1.07
USP47-211ENST00000531513 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
USP47-211ENST00000531513 FRRS1LQ9P0K9 344 aa8.38□□□□□ -1.07
USP47-211ENST00000531513 A6NJR5 290 aa8.37□□□□□ -1.07
USP47-211ENST00000531513 LMOD1P29536 600 aaPredicted RBP8.37□□□□□ -1.07
USP47-211ENST00000531513 TRPM4Q8TD43 1214 aa8.37□□□□□ -1.07
USP47-211ENST00000531513 IFT43Q96FT9 208 aa8.37□□□□□ -1.07
USP47-211ENST00000531513 VRTNQ9H8Y1 702 aa8.37□□□□□ -1.07
USP47-211ENST00000531513 FOXO3O43524 673 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 SASH3O75995 380 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 MICAL2O94851 1124 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 RARAP10276 462 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 TARSP26639 723 aaKnown RBP8.36□□□□□ -1.07
USP47-211ENST00000531513 WEE1P30291 646 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 GPLD1P80108 840 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 ELMSAN1Q6PJG2 1045 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 KRTAP19-1Q8IUB9 90 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 DTWD1Q8N5C7 304 aa8.36□□□□□ -1.07
USP47-211ENST00000531513 FBXO11Q86XK2 927 aa8.35□□□□□ -1.07
USP47-211ENST00000531513 WFDC8Q8IUA0 241 aa8.35□□□□□ -1.07
USP47-211ENST00000531513 MYO19Q96H55 970 aa8.35□□□□□ -1.07
USP47-211ENST00000531513 USP20Q9Y2K6 914 aa8.35□□□□□ -1.07
USP47-211ENST00000531513 LRP8Q14114 963 aa8.34□□□□□ -1.07
USP47-211ENST00000531513 WFDC12Q8WWY7 111 aa8.34□□□□□ -1.07
USP47-211ENST00000531513 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
USP47-211ENST00000531513 NOS3P29474 1203 aa8.33□□□□□ -1.08
USP47-211ENST00000531513 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
USP47-211ENST00000531513 C11orf91Q3C1V1 193 aa8.33□□□□□ -1.08
USP47-211ENST00000531513 HFE2Q6ZVN8 426 aa8.33□□□□□ -1.08
USP47-211ENST00000531513 SMG9Q9H0W8 520 aaKnown RBP8.33□□□□□ -1.08
USP47-211ENST00000531513 C11orf16Q9NQ32 467 aa8.33□□□□□ -1.08
USP47-211ENST00000531513 OPLAHO14841 1288 aa8.32□□□□□ -1.08
USP47-211ENST00000531513 DEAF1O75398 565 aaPredicted RBP8.32□□□□□ -1.08
USP47-211ENST00000531513 EIF2AK2P19525 551 aaKnown RBP8.32□□□□□ -1.08
USP47-211ENST00000531513 NRLP54845 237 aa8.32□□□□□ -1.08
USP47-211ENST00000531513 TTC9Q92623 222 aa8.32□□□□□ -1.08
USP47-211ENST00000531513 LRFN2Q9ULH4 789 aa8.32□□□□□ -1.08
USP47-211ENST00000531513 RTCBQ9Y3I0 505 aaKnown RBP8.32□□□□□ -1.08
USP47-211ENST00000531513 NBPF11Q86T75 865 aa8.31□□□□□ -1.08
USP47-211ENST00000531513 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 ARID4AP29374 1257 aaPredicted RBP8.3□□□□□ -1.08
USP47-211ENST00000531513 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 IGF2-ASQ6U949 168 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 TREML1Q86YW5 311 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 MEGF10Q96KG7 1140 aa8.3□□□□□ -1.08
USP47-211ENST00000531513 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
USP47-211ENST00000531513 XYLBO75191 536 aa8.29□□□□□ -1.08
USP47-211ENST00000531513 EGFRP00533 1210 aa8.29□□□□□ -1.08
USP47-211ENST00000531513 FAM200AQ8TCP9 573 aa8.29□□□□□ -1.08
USP47-211ENST00000531513 DLL1O00548 723 aa8.28□□□□□ -1.08
USP47-211ENST00000531513 HYAL3O43820 417 aaPredicted RBP8.28□□□□□ -1.08
USP47-211ENST00000531513 FKBP5Q13451 457 aaPredicted RBP8.28□□□□□ -1.08
USP47-211ENST00000531513 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
USP47-211ENST00000531513 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
USP47-211ENST00000531513 J3QW42 95 aa8.27□□□□□ -1.09
USP47-211ENST00000531513 COX20Q5RI15 118 aa8.27□□□□□ -1.09
USP47-211ENST00000531513 NSUN5Q96P11 429 aaKnown RBP8.27□□□□□ -1.09
USP47-211ENST00000531513 KCNMB2Q9Y691 235 aa8.27□□□□□ -1.09
USP47-211ENST00000531513 BTBD11A6QL63 1104 aa8.26□□□□□ -1.09
USP47-211ENST00000531513 MMP20O60882 483 aa8.26□□□□□ -1.09
USP47-211ENST00000531513 PSAPP07602 524 aa8.26□□□□□ -1.09
USP47-211ENST00000531513 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
USP47-211ENST00000531513 GDF6Q6KF10 455 aaPredicted RBP8.26□□□□□ -1.09
USP47-211ENST00000531513 ZMYND15Q9H091 742 aa8.26□□□□□ -1.09
USP47-211ENST00000531513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP47-211ENST00000531513 NOVA2Q9UNW9 492 aaKnown RBP8.26□□□□□ -1.09
USP47-211ENST00000531513 PRR23CQ6ZRP0 262 aa8.25□□□□□ -1.09
USP47-211ENST00000531513 PRIMPOLQ96LW4 560 aa8.25□□□□□ -1.09
USP47-211ENST00000531513 LOC102724428A0A0B4J2F2 783 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 GHRHP01286 108 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 HOXD8P13378 290 aaPredicted RBP8.24□□□□□ -1.09
USP47-211ENST00000531513 RFX1P22670 979 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 SOX18P35713 384 aa8.24□□□□□ -1.09
USP47-211ENST00000531513 SIK1P57059 783 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms