RNA–Protein interactions for RNA: ENST00000531498.5

TRIM66-208, Transcript of tripartite motif containing 66, human

TSL 1 (best)

Gene TRIM66, Length 1,210 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM66-208	ENST00000531498	GRAP	Q13588	217 aa		11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	CCDC93	Q567U6	631 aa		11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	GRAPL	Q8TC17	118 aa	Predicted RBP	11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	ZNF526	Q8TF50	670 aa	Predicted RBP	11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	CELF1	Q92879	486 aa	Known RBP	11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	SRCIN1	Q9C0H9	1055 aa		11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	BRCA1	P38398	1863 aa	Known RBP	11.69	□□□□□ -0.54
TRIM66-208	ENST00000531498	SLX4	Q8IY92	1834 aa		11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	MYCN	P04198	464 aa	Predicted RBP	11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	CTSW	P56202	376 aa		11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	FRAT1	Q92837	279 aa	Predicted RBP	11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	TNN	Q9UQP3	1299 aa		11.68	□□□□□ -0.54
TRIM66-208	ENST00000531498	DLEC1	Q9Y238	1755 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	ALDH1L1	O75891	902 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	HSP90B1	P14625	803 aa	Known RBP	11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	CCDC152	Q4G0S7	254 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	SOGA3	Q5TF21	947 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	TTLL11	Q8NHH1	800 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	TAOK3	Q9H2K8	898 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	GREM2	Q9H772	168 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	ATP6V0A2	Q9Y487	856 aa		11.67	□□□□□ -0.54
TRIM66-208	ENST00000531498	GRM8	O00222	908 aa		11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	BBOX1	O75936	387 aa		11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	LMNB1	P20700	586 aa		11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	BRPF1	P55201	1214 aa	Predicted RBP	11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	EPHA10	Q5JZY3	1008 aa		11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	RTKN2	Q8IZC4	609 aa		11.66	□□□□□ -0.54
TRIM66-208	ENST00000531498	RPS8	P62241	208 aa	Known RBP	11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	FOXO4	P98177	505 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	FAM161A	Q3B820	660 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	SP8	Q8IXZ3	490 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	CLUAP1	Q96AJ1	413 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	SUCLG2	Q96I99	432 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	PLA2G12B	Q9BX93	195 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	API5	Q9BZZ5	524 aa	Known RBP	11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	TMX4	Q9H1E5	349 aa	Predicted RBP	11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	CHMP3	Q9Y3E7	222 aa		11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	DDX60	Q8IY21	1712 aa	Known RBP	11.65	□□□□□ -0.54
TRIM66-208	ENST00000531498	COL4A1	P02462	1669 aa		11.65	□□□□□ -0.55
TRIM66-208	ENST00000531498	CC2D2B	Q6DHV5	1058 aa		11.64	□□□□□ -0.55
TRIM66-208	ENST00000531498	LMBR1L	Q6UX01	489 aa		11.64	□□□□□ -0.55
TRIM66-208	ENST00000531498	ARFGEF1	Q9Y6D6	1849 aa		11.64	□□□□□ -0.55
TRIM66-208	ENST00000531498	KIF16B	Q96L93	1317 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	LTBP3	Q9NS15	1303 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	IPO8	O15397	1037 aa	Known RBP	11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	CSF1R	P07333	972 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	TRIM27	P14373	513 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	ITGA6	P23229	1130 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	CCT4	P50991	539 aa	Known RBP	11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	GPSM2	P81274	684 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	DPP8	Q6V1X1	898 aa	Predicted RBP	11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	ANKRD18A	Q8IVF6	992 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	MPND	Q8N594	471 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	KAZALD1	Q96I82	304 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	GPR101	Q96P66	508 aa	Predicted RBP	11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	USP44	Q9H0E7	712 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	CACNA1S	Q13698	1873 aa		11.63	□□□□□ -0.55
TRIM66-208	ENST00000531498	SNED1	Q8TER0	1413 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	LAMB2	P55268	1798 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	IARS	P41252	1262 aa	Known RBP	11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	AOC3	Q16853	763 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	ZKSCAN2	Q63HK3	967 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	ATF7IP	Q6VMQ6	1270 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	ARHGAP45	Q92619	1136 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	CDC5L	Q99459	802 aa	Known RBP	11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	PSMD1	Q99460	953 aa		11.62	□□□□□ -0.55
TRIM66-208	ENST00000531498	ANKRD18B	A2A2Z9	1011 aa		11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	WTIP	A6NIX2	430 aa	Predicted RBP	11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	C6orf229	H3BNL8	230 aa		11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	TMC4	Q7Z404	712 aa		11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	ZNF594	Q96JF6	807 aa	Predicted RBP	11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	BICC1	Q9H694	974 aa	Known RBP	11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.61	□□□□□ -0.55
TRIM66-208	ENST00000531498	UTY	O14607	1347 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	CACNA1F	O60840	1977 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	TAF1	P21675	1872 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	RIMBP2	O15034	1052 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	PPIP5K2	O43314	1243 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	IGHMBP2	P38935	993 aa	Known RBP	11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	IFIT5	Q13325	482 aa	Known RBP	11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	INTS3	Q68E01	1043 aa	Known RBP	11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	LARGE2	Q8N3Y3	721 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	TMEM57	Q8N5G2	664 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	ANKRD44	Q8N8A2	993 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	MPHOSPH8	Q99549	860 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	MEIS3	Q99687	375 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	ANKIB1	Q9P2G1	1089 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	POLL	Q9UGP5	575 aa		11.6	□□□□□ -0.55
TRIM66-208	ENST00000531498	CHD4	Q14839	1912 aa		11.59	□□□□□ -0.55
TRIM66-208	ENST00000531498	RTL9	Q8NET4	1388 aa		11.59	□□□□□ -0.55
TRIM66-208	ENST00000531498	PLIN1	O60240	522 aa		11.59	□□□□□ -0.55
TRIM66-208	ENST00000531498	DDN	O94850	711 aa	Predicted RBP	11.59	□□□□□ -0.55
TRIM66-208	ENST00000531498	UFL1	O94874	794 aa		11.59	□□□□□ -0.55
TRIM66-208	ENST00000531498	UBTFL1	P0CB47	393 aa	Predicted RBP	11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms