RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 GLIS2Q9BZE0 524 aaPredicted RBP17.41■□□□□ 0.38
SSH3-207ENST00000531495 BABAM1Q9NWV8 329 aa17.41■□□□□ 0.38
SSH3-207ENST00000531495 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
SSH3-207ENST00000531495 CNOT7Q9UIV1 285 aaKnown RBP17.41■□□□□ 0.38
SSH3-207ENST00000531495 RAD17O75943 681 aa17.4■□□□□ 0.38
SSH3-207ENST00000531495 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
SSH3-207ENST00000531495 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
SSH3-207ENST00000531495 TSKSQ9UJT2 592 aa17.4■□□□□ 0.38
SSH3-207ENST00000531495 COL4A5P29400 1685 aa17.39■□□□□ 0.37
SSH3-207ENST00000531495 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
SSH3-207ENST00000531495 RGS19P49795 217 aa17.39■□□□□ 0.37
SSH3-207ENST00000531495 RIPK4P57078 832 aa17.39■□□□□ 0.37
SSH3-207ENST00000531495 GRAPQ13588 217 aa17.39■□□□□ 0.37
SSH3-207ENST00000531495 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
SSH3-207ENST00000531495 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
SSH3-207ENST00000531495 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 NOGQ13253 232 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 PDIA6Q15084 440 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
SSH3-207ENST00000531495 NUP98P52948 1817 aa17.37■□□□□ 0.37
SSH3-207ENST00000531495 SLC51AQ86UW1 340 aa17.37■□□□□ 0.37
SSH3-207ENST00000531495 ANXA1P04083 346 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 HIRAP54198 1017 aaPredicted RBP17.36■□□□□ 0.37
SSH3-207ENST00000531495 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 USP48Q86UV5 1035 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 DPF2Q92785 391 aa17.36■□□□□ 0.37
SSH3-207ENST00000531495 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 LAMB4A4D0S4 1761 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 SLC34A2O95436 690 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 HUNKP57058 714 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 PROSER3Q2NL68 480 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 MICALL2Q8IY33 904 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 MCOLN1Q9GZU1 580 aa17.35■□□□□ 0.37
SSH3-207ENST00000531495 NSFL1CQ9UNZ2 370 aaKnown RBP17.35■□□□□ 0.37
SSH3-207ENST00000531495 DGKZQ13574 1117 aa17.34■□□□□ 0.37
SSH3-207ENST00000531495 C2orf69Q8N8R5 385 aa17.34■□□□□ 0.37
SSH3-207ENST00000531495 TRPM4Q8TD43 1214 aa17.34■□□□□ 0.37
SSH3-207ENST00000531495 DCPSQ96C86 337 aaKnown RBP17.34■□□□□ 0.37
SSH3-207ENST00000531495 C6orf229H3BNL8 230 aa17.33■□□□□ 0.36
SSH3-207ENST00000531495 KRT26Q7Z3Y9 468 aa17.33■□□□□ 0.36
SSH3-207ENST00000531495 CCDC102AQ96A19 550 aa17.33■□□□□ 0.36
SSH3-207ENST00000531495 EYA3Q99504 573 aa17.33■□□□□ 0.36
SSH3-207ENST00000531495 G3V3G9 751 aa17.32■□□□□ 0.36
SSH3-207ENST00000531495 RPS12P25398 132 aaKnown RBP17.32■□□□□ 0.36
SSH3-207ENST00000531495 DCAF8Q5TAQ9 597 aa17.32■□□□□ 0.36
SSH3-207ENST00000531495 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
SSH3-207ENST00000531495 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 KDM3BQ7LBC6 1761 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 YDJCA8MPS7 323 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 PSMD14O00487 310 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
SSH3-207ENST00000531495 RBM26Q5T8P6 1007 aaKnown RBP17.31■□□□□ 0.36
SSH3-207ENST00000531495 RGMBQ6NW40 437 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 SAMD7Q7Z3H4 446 aa17.31■□□□□ 0.36
SSH3-207ENST00000531495 GBA2Q9HCG7 927 aaPredicted RBP17.31■□□□□ 0.36
SSH3-207ENST00000531495 HSP90B1P14625 803 aaKnown RBP17.3■□□□□ 0.36
SSH3-207ENST00000531495 TBC1D10BQ4KMP7 808 aaPredicted RBP17.3■□□□□ 0.36
SSH3-207ENST00000531495 PLBD2Q8NHP8 589 aa17.3■□□□□ 0.36
SSH3-207ENST00000531495 DBNDD1Q9H9R9 158 aa17.3■□□□□ 0.36
SSH3-207ENST00000531495 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
SSH3-207ENST00000531495 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
SSH3-207ENST00000531495 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
SSH3-207ENST00000531495 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
SSH3-207ENST00000531495 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
SSH3-207ENST00000531495 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
SSH3-207ENST00000531495 SULF1Q8IWU6 871 aa17.28■□□□□ 0.36
SSH3-207ENST00000531495 FAM89AQ96GI7 184 aa17.28■□□□□ 0.36
SSH3-207ENST00000531495 SAGE1Q9NXZ1 904 aa17.28■□□□□ 0.36
SSH3-207ENST00000531495 DBF4Q9UBU7 674 aaPredicted RBP17.28■□□□□ 0.36
SSH3-207ENST00000531495 THSD7BQ9C0I4 1608 aa17.28■□□□□ 0.36
SSH3-207ENST00000531495 CHL1O00533 1208 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 ECE2O60344 883 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
SSH3-207ENST00000531495 KIF23Q02241 960 aaPredicted RBP17.27■□□□□ 0.36
SSH3-207ENST00000531495 RALBP1Q15311 655 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 DOK7Q18PE1 504 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 HDGFL1Q5TGJ6 251 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 CELF1Q92879 486 aaKnown RBP17.27■□□□□ 0.36
SSH3-207ENST00000531495 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
SSH3-207ENST00000531495 ATP5J2-PTCD1G3V325 749 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 HOXB7P09629 217 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 GPSM2P81274 684 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
SSH3-207ENST00000531495 ZNF428Q96B54 188 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 ZIC5Q96T25 663 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 ISCA1Q9BUE6 129 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 POLLQ9UGP5 575 aa17.26■□□□□ 0.35
SSH3-207ENST00000531495 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
SSH3-207ENST00000531495 IRS4O14654 1257 aaPredicted RBP17.25■□□□□ 0.35
SSH3-207ENST00000531495 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
SSH3-207ENST00000531495 TRPA1O75762 1119 aa17.24■□□□□ 0.35
SSH3-207ENST00000531495 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms