RNA–Protein interactions for RNA: ENST00000531171.5

RB1-206, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 4

Gene RB1, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-206ENST00000531171 KRT28Q7Z3Y7 464 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 ZNF598Q86UK7 904 aaKnown RBP9.04□□□□□ -0.96
RB1-206ENST00000531171 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 IP6K1Q92551 441 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 BAP1Q92560 729 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 TNNQ9UQP3 1299 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 USP19O94966 1318 aa9.04□□□□□ -0.96
RB1-206ENST00000531171 MSH6P52701 1360 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 WNT7BP56706 349 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 SH3BP2P78314 561 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 SKOR1P84550 965 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 XPCQ01831 940 aaPredicted RBP9.03□□□□□ -0.96
RB1-206ENST00000531171 DCTN1Q14203 1278 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 ATF7IPQ6VMQ6 1270 aa9.03□□□□□ -0.96
RB1-206ENST00000531171 RTF1Q92541 710 aaKnown RBP9.03□□□□□ -0.96
RB1-206ENST00000531171 GPKOWQ92917 476 aaPredicted RBP eCLIP9.03□□□□□ -0.96
RB1-206ENST00000531171 LTV1Q96GA3 475 aaPredicted RBP9.03□□□□□ -0.96
RB1-206ENST00000531171 NOB1Q9ULX3 412 aaKnown RBP9.03□□□□□ -0.96
RB1-206ENST00000531171 ZC3H4Q9UPT8 1303 aaKnown RBP9.03□□□□□ -0.96
RB1-206ENST00000531171 RGPD2P0DJD1 1756 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 ZBTB7CA1YPR0 619 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 VAMP4O75379 141 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 TRIM27P14373 513 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 MTHFSDQ2M296 383 aaKnown RBP9.02□□□□□ -0.97
RB1-206ENST00000531171 TWISTNBQ3B726 338 aaPredicted RBP9.02□□□□□ -0.97
RB1-206ENST00000531171 ZNF697Q5TEC3 545 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 NBPF14Q5TI25 921 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 MCM10Q7L590 875 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 NDUFB9Q9Y6M9 179 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 CRB1P82279 1406 aa9.02□□□□□ -0.97
RB1-206ENST00000531171 KIAA0232Q92628 1395 aa9.01□□□□□ -0.97
RB1-206ENST00000531171 CAMTA1Q9Y6Y1 1673 aa9.01□□□□□ -0.97
RB1-206ENST00000531171 CHL1O00533 1208 aa9.01□□□□□ -0.97
RB1-206ENST00000531171 HTATSF1O43719 755 aaKnown RBP9.01□□□□□ -0.97
RB1-206ENST00000531171 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
RB1-206ENST00000531171 DDX19BQ9UMR2 479 aa9.01□□□□□ -0.97
RB1-206ENST00000531171 MAP3K5Q99683 1374 aa9□□□□□ -0.97
RB1-206ENST00000531171 MED1Q15648 1581 aaPredicted RBP9□□□□□ -0.97
RB1-206ENST00000531171 GCP02774 474 aa9□□□□□ -0.97
RB1-206ENST00000531171 PDXDC2PQ6P474 469 aa9□□□□□ -0.97
RB1-206ENST00000531171 ARHGEF25Q86VW2 580 aa9□□□□□ -0.97
RB1-206ENST00000531171 ITPRIPQ8IWB1 547 aa9□□□□□ -0.97
RB1-206ENST00000531171 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
RB1-206ENST00000531171 PNMA1Q8ND90 353 aa9□□□□□ -0.97
RB1-206ENST00000531171 ARHGAP45Q92619 1136 aa9□□□□□ -0.97
RB1-206ENST00000531171 TBC1D2BQ9UPU7 963 aa9□□□□□ -0.97
RB1-206ENST00000531171 LMO7Q8WWI1 1683 aa9□□□□□ -0.97
RB1-206ENST00000531171 NPHP3Q7Z494 1330 aa9□□□□□ -0.97
RB1-206ENST00000531171 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 ELL2O00472 640 aaPredicted RBP8.99□□□□□ -0.97
RB1-206ENST00000531171 IGHDP01880 384 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 SH3BP5LQ7L8J4 393 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 TMEM57Q8N5G2 664 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 USHBP1Q8N6Y0 703 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 FOXJ1Q92949 421 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 RWDD1Q9H446 243 aaPredicted RBP8.99□□□□□ -0.97
RB1-206ENST00000531171 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
RB1-206ENST00000531171 NCAPD2Q15021 1401 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 FAM208AQ9UK61 1670 aaKnown RBP8.98□□□□□ -0.97
RB1-206ENST00000531171 PXDNQ92626 1479 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 WNT7AO00755 349 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 RC3H1Q5TC82 1133 aaKnown RBP8.98□□□□□ -0.97
RB1-206ENST00000531171 NBPF6Q5VWK0 638 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 TRIM67Q6ZTA4 783 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 NBPF4Q96M43 638 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 API5Q9BZZ5 524 aaKnown RBP8.98□□□□□ -0.97
RB1-206ENST00000531171 CHMP4BQ9H444 224 aaKnown RBP8.98□□□□□ -0.97
RB1-206ENST00000531171 GDPD2Q9HCC8 539 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 PKD2L1Q9P0L9 805 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 TSPYL4Q9UJ04 414 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 ABCC6O95255 1503 aa8.98□□□□□ -0.97
RB1-206ENST00000531171 VIRMAQ69YN4 1812 aaKnown RBP8.98□□□□□ -0.97
RB1-206ENST00000531171 GDF9O60383 454 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 SKAP1Q86WV1 359 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 ANKRD24Q8TF21 1146 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 OCSTAMPQ9BR26 566 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 PRM3Q9NNZ6 103 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 GPSM3Q9Y4H4 160 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 ABCC4O15439 1325 aa8.97□□□□□ -0.97
RB1-206ENST00000531171 RGS3P49796 1198 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 IRF5Q13568 498 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 BPHLQ86WA6 291 aaPredicted RBP8.96□□□□□ -0.98
RB1-206ENST00000531171 LRRC59Q96AG4 307 aaKnown RBP8.96□□□□□ -0.98
RB1-206ENST00000531171 BACH2Q9BYV9 841 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 BABAM1Q9NWV8 329 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 COL18A1P39060 1754 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 KDM3BQ7LBC6 1761 aa8.96□□□□□ -0.98
RB1-206ENST00000531171 HDAC1Q13547 482 aaPredicted RBP8.95□□□□□ -0.98
RB1-206ENST00000531171 KRT24Q2M2I5 525 aa8.95□□□□□ -0.98
RB1-206ENST00000531171 PLEKHO1Q53GL0 409 aaPredicted RBP8.95□□□□□ -0.98
RB1-206ENST00000531171 DDX17Q92841 729 aaKnown RBP8.95□□□□□ -0.98
RB1-206ENST00000531171 C1QTNF2Q9BXJ5 285 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms