RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 NRXN2Q9P2S2 1712 aa19.31■□□□□ 0.68
CCS-206ENST00000530961 CASP7P55210 303 aa19.3■□□□□ 0.68
CCS-206ENST00000530961 INTS3Q68E01 1043 aaKnown RBP19.3■□□□□ 0.68
CCS-206ENST00000530961 C3orf67Q6ZVT6 689 aa19.3■□□□□ 0.68
CCS-206ENST00000530961 JARID2Q92833 1246 aaPredicted RBP19.3■□□□□ 0.68
CCS-206ENST00000530961 CRAMP1Q96RY5 1269 aa19.3■□□□□ 0.68
CCS-206ENST00000530961 PLA2G12BQ9BX93 195 aa19.3■□□□□ 0.68
CCS-206ENST00000530961 BCS1LQ9Y276 419 aa19.3■□□□□ 0.68
CCS-206ENST00000530961 ABCC4O15439 1325 aa19.29■□□□□ 0.68
CCS-206ENST00000530961 MS4A1P11836 297 aa19.29■□□□□ 0.68
CCS-206ENST00000530961 UTYO14607 1347 aa19.28■□□□□ 0.68
CCS-206ENST00000530961 CCDC152Q4G0S7 254 aa19.28■□□□□ 0.68
CCS-206ENST00000530961 DDX46Q7L014 1031 aaKnown RBP19.28■□□□□ 0.68
CCS-206ENST00000530961 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
CCS-206ENST00000530961 DZIP1LQ8IYY4 767 aaKnown RBP19.27■□□□□ 0.68
CCS-206ENST00000530961 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.27■□□□□ 0.68
CCS-206ENST00000530961 SMC1BQ8NDV3 1235 aa19.27■□□□□ 0.68
CCS-206ENST00000530961 USP44Q9H0E7 712 aa19.27■□□□□ 0.68
CCS-206ENST00000530961 HDAC5Q9UQL6 1122 aa19.27■□□□□ 0.68
CCS-206ENST00000530961 BBOX1O75936 387 aa19.26■□□□□ 0.67
CCS-206ENST00000530961 CTSWP56202 376 aa19.26■□□□□ 0.67
CCS-206ENST00000530961 MLLT1Q03111 559 aaPredicted RBP19.26■□□□□ 0.67
CCS-206ENST00000530961 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
CCS-206ENST00000530961 CLUAP1Q96AJ1 413 aa19.26■□□□□ 0.67
CCS-206ENST00000530961 NBPF7P0C2Y1 421 aaPredicted RBP19.25■□□□□ 0.67
CCS-206ENST00000530961 SOGA3Q5TF21 947 aa19.25■□□□□ 0.67
CCS-206ENST00000530961 TTLL11Q8NHH1 800 aa19.25■□□□□ 0.67
CCS-206ENST00000530961 NUP98P52948 1817 aa19.24■□□□□ 0.67
CCS-206ENST00000530961 CSF1RP07333 972 aa19.24■□□□□ 0.67
CCS-206ENST00000530961 GRAPQ13588 217 aa19.24■□□□□ 0.67
CCS-206ENST00000530961 GRAPLQ8TC17 118 aaPredicted RBP19.24■□□□□ 0.67
CCS-206ENST00000530961 PRDM10Q9NQV6 1147 aa19.24■□□□□ 0.67
CCS-206ENST00000530961 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
CCS-206ENST00000530961 CC2D2BQ6DHV5 1058 aa19.23■□□□□ 0.67
CCS-206ENST00000530961 TMC4Q7Z404 712 aa19.23■□□□□ 0.67
CCS-206ENST00000530961 TMEM57Q8N5G2 664 aa19.23■□□□□ 0.67
CCS-206ENST00000530961 TNNQ9UQP3 1299 aa19.23■□□□□ 0.67
CCS-206ENST00000530961 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
CCS-206ENST00000530961 UBTFL1P0CB47 393 aaPredicted RBP19.22■□□□□ 0.67
CCS-206ENST00000530961 FOXO4P98177 505 aa19.22■□□□□ 0.67
CCS-206ENST00000530961 C7orf43Q8WVR3 580 aa19.22■□□□□ 0.67
CCS-206ENST00000530961 TMX4Q9H1E5 349 aaPredicted RBP19.22■□□□□ 0.67
CCS-206ENST00000530961 RTL9Q8NET4 1388 aa19.21■□□□□ 0.67
CCS-206ENST00000530961 C21orf2O43822 256 aa19.21■□□□□ 0.67
CCS-206ENST00000530961 GNAI3P08754 354 aa19.21■□□□□ 0.67
CCS-206ENST00000530961 RPS8P62241 208 aaKnown RBP19.21■□□□□ 0.67
CCS-206ENST00000530961 GRIPAP1Q4V328 841 aa19.21■□□□□ 0.67
CCS-206ENST00000530961 SUCLG2Q96I99 432 aa19.21■□□□□ 0.67
CCS-206ENST00000530961 PPEF1O14829 653 aaPredicted RBP19.2■□□□□ 0.66
CCS-206ENST00000530961 RLBP1P12271 317 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 PDE3AQ14432 1141 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 LMBR1LQ6UX01 489 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 ARHGAP27Q6ZUM4 889 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
CCS-206ENST00000530961 GREM2Q9H772 168 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 ATP6V0A2Q9Y487 856 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 KIF13BQ9NQT8 1826 aa19.2■□□□□ 0.66
CCS-206ENST00000530961 AFDNP55196 1824 aaKnown RBP19.19■□□□□ 0.66
CCS-206ENST00000530961 PLIN1O60240 522 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 RABL6Q3YEC7 729 aaPredicted RBP19.19■□□□□ 0.66
CCS-206ENST00000530961 CCDC93Q567U6 631 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 EPHA10Q5JZY3 1008 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 SP8Q8IXZ3 490 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 CELF1Q92879 486 aaKnown RBP19.19■□□□□ 0.66
CCS-206ENST00000530961 KAZALD1Q96I82 304 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 CCDC85AQ96PX6 553 aaPredicted RBP19.19■□□□□ 0.66
CCS-206ENST00000530961 MEIS3Q99687 375 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 SEC31BQ9NQW1 1179 aa19.19■□□□□ 0.66
CCS-206ENST00000530961 ITGA6P23229 1130 aa19.18■□□□□ 0.66
CCS-206ENST00000530961 IFIT5Q13325 482 aaKnown RBP19.18■□□□□ 0.66
CCS-206ENST00000530961 ANKRD18AQ8IVF6 992 aa19.18■□□□□ 0.66
CCS-206ENST00000530961 PANK1Q8TE04 598 aa19.18■□□□□ 0.66
CCS-206ENST00000530961 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
CCS-206ENST00000530961 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
CCS-206ENST00000530961 ANKRD18BA2A2Z9 1011 aa19.17■□□□□ 0.66
CCS-206ENST00000530961 CCDC57Q2TAC2 916 aa19.17■□□□□ 0.66
CCS-206ENST00000530961 BICC1Q9H694 974 aaKnown RBP19.17■□□□□ 0.66
CCS-206ENST00000530961 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
CCS-206ENST00000530961 ANKRD36CQ5JPF3 1778 aa19.16■□□□□ 0.66
CCS-206ENST00000530961 ZBTB7BO15156 539 aaPredicted RBP19.16■□□□□ 0.66
CCS-206ENST00000530961 ABHD8Q96I13 439 aa19.16■□□□□ 0.66
CCS-206ENST00000530961 CHMP4BQ9H444 224 aaKnown RBP19.16■□□□□ 0.66
CCS-206ENST00000530961 FOXN1O15353 648 aa19.15■□□□□ 0.66
CCS-206ENST00000530961 GNAI2P04899 355 aa19.15■□□□□ 0.66
CCS-206ENST00000530961 IGHMBP2P38935 993 aaKnown RBP19.15■□□□□ 0.66
CCS-206ENST00000530961 ANKRD44Q8N8A2 993 aa19.15■□□□□ 0.66
CCS-206ENST00000530961 RRAGCQ9HB90 399 aa19.15■□□□□ 0.66
CCS-206ENST00000530961 BSDC1Q9NW68 430 aaPredicted RBP19.15■□□□□ 0.66
CCS-206ENST00000530961 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
CCS-206ENST00000530961 MVPQ14764 893 aaKnown RBP19.14■□□□□ 0.65
CCS-206ENST00000530961 DDX19BQ9UMR2 479 aa19.14■□□□□ 0.65
CCS-206ENST00000530961 LRRFIP2Q9Y608 721 aaKnown RBP19.14■□□□□ 0.65
CCS-206ENST00000530961 C9orf131Q5VYM1 1079 aa19.13■□□□□ 0.65
CCS-206ENST00000530961 MPHOSPH8Q99549 860 aa19.13■□□□□ 0.65
CCS-206ENST00000530961 TAOK3Q9H2K8 898 aa19.13■□□□□ 0.65
CCS-206ENST00000530961 LTBP3Q9NS15 1303 aa19.13■□□□□ 0.65
CCS-206ENST00000530961 TNRC6CQ9HCJ0 1690 aaKnown RBP19.13■□□□□ 0.65
CCS-206ENST00000530961 KIAA1551Q9HCM1 1747 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms