RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 USP48Q86UV5 1035 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 GPR108Q9NPR9 543 aa20.58■□□□□ 0.89
BRCA2-204ENST00000530893 CWC25Q9NXE8 425 aaPredicted RBP20.58■□□□□ 0.89
BRCA2-204ENST00000530893 KRT32Q14532 448 aa20.58■□□□□ 0.88
BRCA2-204ENST00000530893 HS1BP3Q53T59 392 aa20.58■□□□□ 0.88
BRCA2-204ENST00000530893 TNS2Q63HR2 1409 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 LARGE1O95461 756 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 GJB2P29033 226 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 FOXO4P98177 505 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 BLOC1S2Q6QNY1 142 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 LMBR1LQ6UX01 489 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 CCDC83Q8IWF9 413 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 CCDC191Q8NCU4 936 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 HAUS7Q99871 368 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 TCHHQ07283 1943 aa20.57■□□□□ 0.88
BRCA2-204ENST00000530893 TAF5LO75529 589 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 ME3Q16798 604 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 PDLIM2Q96JY6 352 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 TJP1Q07157 1748 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 SHANK3Q9BYB0 1731 aa20.56■□□□□ 0.88
BRCA2-204ENST00000530893 RPS6KB1P23443 525 aa20.55■□□□□ 0.88
BRCA2-204ENST00000530893 JARID2Q92833 1246 aaPredicted RBP20.55■□□□□ 0.88
BRCA2-204ENST00000530893 SLAIN2Q9P270 581 aa20.55■□□□□ 0.88
BRCA2-204ENST00000530893 HSPA2P54652 639 aa20.54■□□□□ 0.88
BRCA2-204ENST00000530893 UBE2HP62256 183 aa20.54■□□□□ 0.88
BRCA2-204ENST00000530893 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
BRCA2-204ENST00000530893 LETM1O95202 739 aaPredicted RBP20.54■□□□□ 0.88
BRCA2-204ENST00000530893 PDCP20941 246 aa20.54■□□□□ 0.88
BRCA2-204ENST00000530893 IL15P40933 162 aaPredicted RBP20.54■□□□□ 0.88
BRCA2-204ENST00000530893 ZNF589Q86UQ0 364 aaPredicted RBP20.54■□□□□ 0.88
BRCA2-204ENST00000530893 TPCN1Q9ULQ1 816 aa20.54■□□□□ 0.88
BRCA2-204ENST00000530893 DBNDD2Q9BQY9 259 aa20.53■□□□□ 0.88
BRCA2-204ENST00000530893 MTMR6Q9Y217 621 aa20.53■□□□□ 0.88
BRCA2-204ENST00000530893 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
BRCA2-204ENST00000530893 TTLL7Q6ZT98 887 aa20.53■□□□□ 0.88
BRCA2-204ENST00000530893 TSPY26PQ9H489 355 aa20.53■□□□□ 0.88
BRCA2-204ENST00000530893 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 GADD45BO75293 160 aaPredicted RBP20.52■□□□□ 0.88
BRCA2-204ENST00000530893 CIAO1O76071 339 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 MCMDC2Q4G0Z9 681 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 KBTBD3Q8NAB2 608 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 GDPD2Q9HCC8 539 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 CNPY2Q9Y2B0 182 aa20.52■□□□□ 0.88
BRCA2-204ENST00000530893 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 ST3GAL1Q11201 340 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 ZSCAN30Q86W11 494 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
BRCA2-204ENST00000530893 CCDC183Q5T5S1 534 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
BRCA2-204ENST00000530893 FAM184AQ8NB25 1140 aa20.51■□□□□ 0.87
BRCA2-204ENST00000530893 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
BRCA2-204ENST00000530893 A1BGP04217 495 aa20.5■□□□□ 0.87
BRCA2-204ENST00000530893 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
BRCA2-204ENST00000530893 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
BRCA2-204ENST00000530893 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
BRCA2-204ENST00000530893 ZNF609O15014 1411 aa20.5■□□□□ 0.87
BRCA2-204ENST00000530893 STRCQ7RTU9 1775 aa20.5■□□□□ 0.87
BRCA2-204ENST00000530893 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
BRCA2-204ENST00000530893 EYA2O00167 538 aa20.49■□□□□ 0.87
BRCA2-204ENST00000530893 HELLSQ9NRZ9 838 aa20.49■□□□□ 0.87
BRCA2-204ENST00000530893 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
BRCA2-204ENST00000530893 TOB2Q14106 344 aaPredicted RBP20.48■□□□□ 0.87
BRCA2-204ENST00000530893 LARP1BQ659C4 914 aaKnown RBP20.48■□□□□ 0.87
BRCA2-204ENST00000530893 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
BRCA2-204ENST00000530893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.48■□□□□ 0.87
BRCA2-204ENST00000530893 NEK1Q96PY6 1258 aa20.48■□□□□ 0.87
BRCA2-204ENST00000530893 EVA1CP58658 441 aa20.48■□□□□ 0.87
BRCA2-204ENST00000530893 NECAB1Q8N987 351 aa20.48■□□□□ 0.87
BRCA2-204ENST00000530893 DDX54Q8TDD1 881 aaKnown RBP20.48■□□□□ 0.87
BRCA2-204ENST00000530893 ISCA1Q9BUE6 129 aa20.48■□□□□ 0.87
BRCA2-204ENST00000530893 HMGB1P09429 215 aaKnown RBP20.47■□□□□ 0.87
BRCA2-204ENST00000530893 ZBTB3Q9H5J0 574 aa20.47■□□□□ 0.87
BRCA2-204ENST00000530893 PAG1Q9NWQ8 432 aa20.47■□□□□ 0.87
BRCA2-204ENST00000530893 TOGARAM1Q9Y4F4 1720 aa20.47■□□□□ 0.87
BRCA2-204ENST00000530893 NHSL1Q5SYE7 1610 aa20.47■□□□□ 0.87
BRCA2-204ENST00000530893 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
BRCA2-204ENST00000530893 VPS37CA5D8V6 355 aaPredicted RBP20.46■□□□□ 0.87
BRCA2-204ENST00000530893 TCIRG1Q13488 830 aa20.46■□□□□ 0.87
BRCA2-204ENST00000530893 UVSSAQ2YD98 709 aa20.46■□□□□ 0.87
BRCA2-204ENST00000530893 DDX46Q7L014 1031 aaKnown RBP20.46■□□□□ 0.87
BRCA2-204ENST00000530893 NEUROD6Q96NK8 337 aa20.46■□□□□ 0.87
BRCA2-204ENST00000530893 DSCC1Q9BVC3 393 aa20.46■□□□□ 0.87
BRCA2-204ENST00000530893 FIBPO43427 364 aa20.45■□□□□ 0.86
BRCA2-204ENST00000530893 MSNP26038 577 aaKnown RBP20.45■□□□□ 0.86
BRCA2-204ENST00000530893 DNM1Q05193 864 aaKnown RBP20.45■□□□□ 0.86
BRCA2-204ENST00000530893 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
BRCA2-204ENST00000530893 ELP1O95163 1332 aa20.44■□□□□ 0.86
BRCA2-204ENST00000530893 CYP21A2P08686 494 aa20.44■□□□□ 0.86
BRCA2-204ENST00000530893 KRT85P78386 507 aa20.44■□□□□ 0.86
BRCA2-204ENST00000530893 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
BRCA2-204ENST00000530893 STRN4Q9NRL3 753 aa20.44■□□□□ 0.86
BRCA2-204ENST00000530893 NOL7Q9UMY1 257 aaKnown RBP20.44■□□□□ 0.86
BRCA2-204ENST00000530893 PLA2G12BQ9BX93 195 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 GOLIM4O00461 696 aa20.43■□□□□ 0.86
BRCA2-204ENST00000530893 TIMM10P62072 90 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms