RNA–Protein interactions for RNA: ENST00000530882.1

SOX13-208, Transcript of SRY-box 13, human

TSL 3

Gene SOX13, Length 769 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX13-208	ENST00000530882	SBF1	O95248	1867 aa		27.9	■■■□□ 2.06
SOX13-208	ENST00000530882	LINS1	Q8NG48	757 aa		27.9	■■■□□ 2.06
SOX13-208	ENST00000530882	JDP2	Q8WYK2	163 aa		27.9	■■■□□ 2.06
SOX13-208	ENST00000530882	TOMM70	O94826	608 aa		27.89	■■■□□ 2.06
SOX13-208	ENST00000530882	SUPT20H	Q8NEM7	779 aa		27.89	■■■□□ 2.06
SOX13-208	ENST00000530882	JARID2	Q92833	1246 aa	Predicted RBP	27.89	■■■□□ 2.06
SOX13-208	ENST00000530882	CACNA1S	Q13698	1873 aa		27.89	■■■□□ 2.05
SOX13-208	ENST00000530882	DPP8	Q6V1X1	898 aa	Predicted RBP	27.88	■■■□□ 2.05
SOX13-208	ENST00000530882	VEGFA	P15692	232 aa	Predicted RBP	27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	GCKR	Q14397	625 aa		27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	MPND	Q8N594	471 aa		27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	CELF1	Q92879	486 aa	Known RBP	27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	CDCA7L	Q96GN5	454 aa		27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	VPS33B	Q9H267	617 aa		27.87	■■■□□ 2.05
SOX13-208	ENST00000530882	LARGE2	Q8N3Y3	721 aa		27.86	■■■□□ 2.05
SOX13-208	ENST00000530882		F6X3S4	739 aa		27.85	■■■□□ 2.05
SOX13-208	ENST00000530882		H7C1W4	665 aa		27.85	■■■□□ 2.05
SOX13-208	ENST00000530882	RPS8	P62241	208 aa	Known RBP	27.85	■■■□□ 2.05
SOX13-208	ENST00000530882	UBE3B	Q7Z3V4	1068 aa		27.85	■■■□□ 2.05
SOX13-208	ENST00000530882	SLC51A	Q86UW1	340 aa		27.85	■■■□□ 2.05
SOX13-208	ENST00000530882	RTFDC1	Q9BY42	306 aa	Predicted RBP	27.85	■■■□□ 2.05
SOX13-208	ENST00000530882	CTSW	P56202	376 aa		27.84	■■■□□ 2.05
SOX13-208	ENST00000530882	FZD9	O00144	591 aa		27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	PPIP5K2	O43314	1243 aa		27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	DDN	O94850	711 aa	Predicted RBP	27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	TRMT2A	Q8IZ69	625 aa	Known RBP	27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	RBM46	Q8TBY0	533 aa	Known RBP	27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	TIAM2	Q8IVF5	1701 aa		27.83	■■■□□ 2.05
SOX13-208	ENST00000530882	DDX60	Q8IY21	1712 aa	Known RBP	27.82	■■■□□ 2.04
SOX13-208	ENST00000530882	CT47B1	P0C2W7	299 aa	Predicted RBP	27.82	■■■□□ 2.04
SOX13-208	ENST00000530882	BEND3	Q5T5X7	828 aa		27.82	■■■□□ 2.04
SOX13-208	ENST00000530882	SEC31B	Q9NQW1	1179 aa		27.82	■■■□□ 2.04
SOX13-208	ENST00000530882	EIF6	P56537	245 aa	Known RBP	27.81	■■■□□ 2.04
SOX13-208	ENST00000530882	NIM1K	Q8IY84	436 aa		27.81	■■■□□ 2.04
SOX13-208	ENST00000530882	MRPL50	Q8N5N7	158 aa	Known RBP	27.81	■■■□□ 2.04
SOX13-208	ENST00000530882	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.81	■■■□□ 2.04
SOX13-208	ENST00000530882	CDC5L	Q99459	802 aa	Known RBP	27.81	■■■□□ 2.04
SOX13-208	ENST00000530882	PLA2G12B	Q9BX93	195 aa		27.8	■■■□□ 2.04
SOX13-208	ENST00000530882	LAMB2	P55268	1798 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	ZNF541	Q9H0D2	1346 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	AOC3	Q16853	763 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	ALDH1L2	Q3SY69	923 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	SLC4A10	Q6U841	1118 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	ANKRD18A	Q8IVF6	992 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	TTLL11	Q8NHH1	800 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	SSH1	Q8WYL5	1049 aa		27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	NSFL1C	Q9UNZ2	370 aa	Known RBP	27.79	■■■□□ 2.04
SOX13-208	ENST00000530882	PTPRC	P08575	1304 aa		27.78	■■■□□ 2.04
SOX13-208	ENST00000530882	IQCA1L	A6NCM1	817 aa		27.78	■■■□□ 2.04
SOX13-208	ENST00000530882	ALDH1L1	O75891	902 aa		27.77	■■■□□ 2.04
SOX13-208	ENST00000530882	KIAA2012	Q0VF49	1180 aa		27.77	■■■□□ 2.04
SOX13-208	ENST00000530882	L3MBTL3	Q96JM7	780 aa	Predicted RBP	27.77	■■■□□ 2.04
SOX13-208	ENST00000530882	CASP7	P55210	303 aa		27.76	■■■□□ 2.03
SOX13-208	ENST00000530882	FSTL1	Q12841	308 aa		27.76	■■■□□ 2.03
SOX13-208	ENST00000530882	GPC2	Q8N158	579 aa		27.76	■■■□□ 2.03
SOX13-208	ENST00000530882	SRCIN1	Q9C0H9	1055 aa		27.76	■■■□□ 2.03
SOX13-208	ENST00000530882	RTL9	Q8NET4	1388 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	POTEC	B2RU33	542 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	SMC1B	Q8NDV3	1235 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	GREM2	Q9H772	168 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	SMC4	Q9NTJ3	1288 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	CACNA1F	O60840	1977 aa		27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	DICER1	Q9UPY3	1922 aa	Known RBP	27.75	■■■□□ 2.03
SOX13-208	ENST00000530882	CCDC88A	Q3V6T2	1871 aa		27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	GPSM2	P81274	684 aa		27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	EYA3	Q99504	573 aa		27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	BCL2L13	Q9BXK5	485 aa		27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	C9orf78	Q9NZ63	289 aa	Predicted RBP	27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	ZNRF3	Q9ULT6	936 aa		27.74	■■■□□ 2.03
SOX13-208	ENST00000530882	C6orf229	H3BNL8	230 aa		27.73	■■■□□ 2.03
SOX13-208	ENST00000530882	GRM8	O00222	908 aa		27.73	■■■□□ 2.03
SOX13-208	ENST00000530882	HSPA6	P17066	643 aa		27.73	■■■□□ 2.03
SOX13-208	ENST00000530882	ANKIB1	Q9P2G1	1089 aa		27.73	■■■□□ 2.03
SOX13-208	ENST00000530882	WDR90	Q96KV7	1748 aa		27.72	■■■□□ 2.03
SOX13-208	ENST00000530882	WASHC4	Q2M389	1173 aa		27.72	■■■□□ 2.03
SOX13-208	ENST00000530882	PODXL2	Q9NZ53	605 aa		27.72	■■■□□ 2.03
SOX13-208	ENST00000530882	GJA3	Q9Y6H8	435 aa		27.72	■■■□□ 2.03
SOX13-208	ENST00000530882	CSF1R	P07333	972 aa		27.71	■■■□□ 2.03
SOX13-208	ENST00000530882	IGHMBP2	P38935	993 aa	Known RBP	27.71	■■■□□ 2.03
SOX13-208	ENST00000530882	BSDC1	Q9NW68	430 aa	Predicted RBP	27.71	■■■□□ 2.03
SOX13-208	ENST00000530882	HACL1	Q9UJ83	578 aa		27.71	■■■□□ 2.03
SOX13-208	ENST00000530882	TBC1D16	Q8TBP0	767 aa		27.7	■■■□□ 2.02
SOX13-208	ENST00000530882	POLL	Q9UGP5	575 aa		27.7	■■■□□ 2.02
SOX13-208	ENST00000530882	GGA1	Q9UJY5	639 aa		27.7	■■■□□ 2.02
SOX13-208	ENST00000530882	COL4A5	P29400	1685 aa		27.7	■■■□□ 2.02
SOX13-208	ENST00000530882	ITGA6	P23229	1130 aa		27.69	■■■□□ 2.02
SOX13-208	ENST00000530882	FAM161A	Q3B820	660 aa		27.69	■■■□□ 2.02
SOX13-208	ENST00000530882	XDH	P47989	1333 aa		27.68	■■■□□ 2.02
SOX13-208	ENST00000530882	UFL1	O94874	794 aa		27.68	■■■□□ 2.02
SOX13-208	ENST00000530882	LMOD1	P29536	600 aa	Predicted RBP	27.68	■■■□□ 2.02
SOX13-208	ENST00000530882	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.68	■■■□□ 2.02
SOX13-208	ENST00000530882	LRRC37A	A6NMS7	1700 aa		27.67	■■■□□ 2.02
SOX13-208	ENST00000530882	MPHOSPH8	Q99549	860 aa		27.67	■■■□□ 2.02
SOX13-208	ENST00000530882	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.67	■■■□□ 2.02
SOX13-208	ENST00000530882	COL4A1	P02462	1669 aa		27.66	■■■□□ 2.02
SOX13-208	ENST00000530882	ANKRD18B	A2A2Z9	1011 aa		27.66	■■■□□ 2.02
SOX13-208	ENST00000530882	RIMBP2	O15034	1052 aa		27.66	■■■□□ 2.02
SOX13-208	ENST00000530882	ATP2B4	P23634	1241 aa		27.66	■■■□□ 2.02
SOX13-208	ENST00000530882	TNIP1	Q15025	636 aa		27.66	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms