RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ATCAYQ86WG3 371 aa13□□□□□ -0.33
CSDE1-213ENST00000530784 GPR152Q8TDT2 470 aa13□□□□□ -0.33
CSDE1-213ENST00000530784 MTMR7Q9Y216 660 aa13□□□□□ -0.33
CSDE1-213ENST00000530784 DGKGP49619 791 aa12.99□□□□□ -0.33
CSDE1-213ENST00000530784 TRIP4Q15650 581 aaPredicted RBP12.99□□□□□ -0.33
CSDE1-213ENST00000530784 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
CSDE1-213ENST00000530784 FAM13BQ9NYF5 915 aa12.99□□□□□ -0.33
CSDE1-213ENST00000530784 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 RARAP10276 462 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 MPSTP25325 297 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 PDE4CQ08493 712 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 LINC00114Q6XXX2 140 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 DNAJB12Q9NXW2 375 aaKnown RBP12.98□□□□□ -0.33
CSDE1-213ENST00000530784 MKL2Q9ULH7 1088 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 STARD13Q9Y3M8 1113 aa12.98□□□□□ -0.33
CSDE1-213ENST00000530784 PHF20L1A8MW92 1017 aa12.97□□□□□ -0.33
CSDE1-213ENST00000530784 ABL1P00519 1130 aa12.97□□□□□ -0.33
CSDE1-213ENST00000530784 ANO2Q9NQ90 1003 aa12.97□□□□□ -0.33
CSDE1-213ENST00000530784 RASSF7Q02833 373 aa12.96□□□□□ -0.33
CSDE1-213ENST00000530784 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.33
CSDE1-213ENST00000530784 SLC6A14Q9UN76 642 aa12.96□□□□□ -0.33
CSDE1-213ENST00000530784 UBAP1LF5GYI3 381 aa12.95□□□□□ -0.34
CSDE1-213ENST00000530784 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
CSDE1-213ENST00000530784 EIF1AXP47813 144 aaKnown RBP12.95□□□□□ -0.34
CSDE1-213ENST00000530784 ZNF211Q13398 564 aaPredicted RBP12.95□□□□□ -0.34
CSDE1-213ENST00000530784 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
CSDE1-213ENST00000530784 ALBP02768 609 aa12.94□□□□□ -0.34
CSDE1-213ENST00000530784 FKBP4Q02790 459 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSDE1-213ENST00000530784 ZBTB42B2RXF5 422 aa12.93□□□□□ -0.34
CSDE1-213ENST00000530784 NPR3P17342 541 aa12.93□□□□□ -0.34
CSDE1-213ENST00000530784 SERPINB4P48594 390 aa12.93□□□□□ -0.34
CSDE1-213ENST00000530784 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
CSDE1-213ENST00000530784 CC2D2AQ9P2K1 1620 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 M0R082 166 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 MMP20O60882 483 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 SF3B2Q13435 895 aaKnown RBP12.92□□□□□ -0.34
CSDE1-213ENST00000530784 C8orf86Q6ZUL3 223 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 NLRP13Q86W25 1043 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 EDEM1Q92611 657 aa12.92□□□□□ -0.34
CSDE1-213ENST00000530784 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
CSDE1-213ENST00000530784 ZNF587Q96SQ5 575 aaPredicted RBP12.92□□□□□ -0.34
CSDE1-213ENST00000530784 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
CSDE1-213ENST00000530784 MLLT1Q03111 559 aaPredicted RBP12.91□□□□□ -0.34
CSDE1-213ENST00000530784 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
CSDE1-213ENST00000530784 C20orf204Q6ZNR8 217 aa12.91□□□□□ -0.34
CSDE1-213ENST00000530784 TRPM4Q8TD43 1214 aa12.91□□□□□ -0.34
CSDE1-213ENST00000530784 SUV39H2Q9H5I1 410 aa12.91□□□□□ -0.34
CSDE1-213ENST00000530784 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
CSDE1-213ENST00000530784 FNDC3AQ9Y2H6 1198 aaKnown RBP12.91□□□□□ -0.34
CSDE1-213ENST00000530784 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
CSDE1-213ENST00000530784 GNB5O14775 395 aa12.9□□□□□ -0.34
CSDE1-213ENST00000530784 EIF4G1Q04637 1599 aaKnown RBP12.9□□□□□ -0.35
CSDE1-213ENST00000530784 FAM13AO94988 1023 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 GDF11O95390 407 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 ALKBH2Q6NS38 261 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 TXNDC2Q86VQ3 553 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 TMEM151AQ8N4L1 468 aa12.89□□□□□ -0.35
CSDE1-213ENST00000530784 PDGFAP04085 211 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 CPB1P15086 417 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 GPLD1P80108 840 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 AAMPQ13685 434 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 PCSK7Q16549 785 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 NUDT8Q8WV74 236 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 EGFL7Q9UHF1 273 aa12.88□□□□□ -0.35
CSDE1-213ENST00000530784 ICMTO60725 284 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 PSAPP07602 524 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 COL8A1P27658 744 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 MZF1P28698 734 aaPredicted RBP12.87□□□□□ -0.35
CSDE1-213ENST00000530784 NRLP54845 237 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 PSAPL1Q6NUJ1 521 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 HFE2Q6ZVN8 426 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
CSDE1-213ENST00000530784 PIK3R2O00459 728 aa12.86□□□□□ -0.35
CSDE1-213ENST00000530784 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
CSDE1-213ENST00000530784 GGNBP2Q9H3C7 697 aa12.86□□□□□ -0.35
CSDE1-213ENST00000530784 PRDM6Q9NQX0 595 aa12.86□□□□□ -0.35
CSDE1-213ENST00000530784 POLIQ9UNA4 740 aa12.86□□□□□ -0.35
CSDE1-213ENST00000530784 PLAURQ03405 335 aa12.85□□□□□ -0.35
CSDE1-213ENST00000530784 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
CSDE1-213ENST00000530784 A6NHS1 94 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 H3BRB1 525 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 FZD6O60353 706 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 LILRB5O75023 590 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 PCSK2P16519 638 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 PERM1Q5SV97 790 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 NSUN5Q96P11 429 aaKnown RBP12.84□□□□□ -0.35
CSDE1-213ENST00000530784 PLVAPQ9BX97 442 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
CSDE1-213ENST00000530784 ELP3Q9H9T3 547 aa12.84□□□□□ -0.35
CSDE1-213ENST00000530784 J3QW42 95 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 RPLP1P05386 114 aaKnown RBP12.83□□□□□ -0.36
CSDE1-213ENST00000530784 SOX18P35713 384 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 ECM1Q16610 540 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
CSDE1-213ENST00000530784 TTC39BQ5VTQ0 682 aaPredicted RBP12.83□□□□□ -0.36
CSDE1-213ENST00000530784 PDE12Q6L8Q7 609 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms