RNA–Protein interactions for RNA: ENST00000530565.5

CTSF-208, Transcript of cathepsin F, humanhuman

TSL 5

Gene CTSF, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-208ENST00000530565 TRIM28Q13263 835 aaKnown RBP10.89□□□□□ -0.67
CTSF-208ENST00000530565 PPP1R42Q7Z4L9 355 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 CNBD1Q8NA66 436 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 CNKSR1Q969H4 720 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
CTSF-208ENST00000530565 SNED1Q8TER0 1413 aa10.89□□□□□ -0.67
CTSF-208ENST00000530565 ZNF541Q9H0D2 1346 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 NPHP1O15259 732 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 IGKV5-2P06315 115 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 ST5P78524 1137 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 CCDC191Q8NCU4 936 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 MASTLQ96GX5 879 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 WBP1LQ9NX94 342 aa10.88□□□□□ -0.67
CTSF-208ENST00000530565 RNF123Q5XPI4 1314 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 KLRG2A4D1S0 409 aaPredicted RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 IQCA1LA6NCM1 817 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 TMEM88BA6NKF7 163 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 NEURL1BA8MQ27 555 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 CTCFP49711 727 aaPredicted RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 CWF19L2Q2TBE0 894 aaKnown RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 BEND3Q5T5X7 828 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 SOGA3Q5TF21 947 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 SLC4A10Q6U841 1118 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 NUTM1Q86Y26 1132 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 LINS1Q8NG48 757 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 ARHGAP45Q92619 1136 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 FRAT1Q92837 279 aaPredicted RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 API5Q9BZZ5 524 aaKnown RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 CWC25Q9NXE8 425 aaPredicted RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
CTSF-208ENST00000530565 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
CTSF-208ENST00000530565 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 COL4A5P29400 1685 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 IPO8O15397 1037 aaKnown RBP10.86□□□□□ -0.67
CTSF-208ENST00000530565 SLC34A2O95436 690 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 CCDC93Q567U6 631 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 OLFM4Q6UX06 510 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 ABCC12Q96J65 1359 aa10.86□□□□□ -0.67
CTSF-208ENST00000530565 RIC1Q4ADV7 1423 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 ALDH1L1O75891 902 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 HSPA8P11142 646 aaKnown RBP10.85□□□□□ -0.67
CTSF-208ENST00000530565 LBX1P52954 281 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 FKBP4Q02790 459 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTSF-208ENST00000530565 GCKRQ14397 625 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 SLC10A5Q5PT55 438 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 ZKSCAN2Q63HK3 967 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
CTSF-208ENST00000530565 FAM89AQ96GI7 184 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 SRCIN1Q9C0H9 1055 aa10.85□□□□□ -0.67
CTSF-208ENST00000530565 ZNF277Q9NRM2 450 aaPredicted RBP10.85□□□□□ -0.67
CTSF-208ENST00000530565 DDX60Q8IY21 1712 aaKnown RBP10.84□□□□□ -0.67
CTSF-208ENST00000530565 FZD9O00144 591 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 PCCAP05165 728 aaPredicted RBP10.84□□□□□ -0.67
CTSF-208ENST00000530565 TRIM27P14373 513 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 NPR1P16066 1061 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 EPHX2P34913 555 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 EAPPQ56P03 285 aaPredicted RBP10.84□□□□□ -0.67
CTSF-208ENST00000530565 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
CTSF-208ENST00000530565 SYNE4Q8N205 404 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 HACL1Q9UJ83 578 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 LAMB2P55268 1798 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 ABCC4O15439 1325 aa10.84□□□□□ -0.67
CTSF-208ENST00000530565 H7C1W4 665 aa10.83□□□□□ -0.68
CTSF-208ENST00000530565 HCLS1P14317 486 aaPredicted RBP10.83□□□□□ -0.68
CTSF-208ENST00000530565 CCT4P50991 539 aaKnown RBP10.83□□□□□ -0.68
CTSF-208ENST00000530565 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
CTSF-208ENST00000530565 CNTROBQ8N137 903 aa10.83□□□□□ -0.68
CTSF-208ENST00000530565 JARID2Q92833 1246 aaPredicted RBP10.83□□□□□ -0.68
CTSF-208ENST00000530565 ABHD8Q96I13 439 aa10.83□□□□□ -0.68
CTSF-208ENST00000530565 TNNQ9UQP3 1299 aa10.83□□□□□ -0.68
CTSF-208ENST00000530565 CDHR2Q9BYE9 1310 aa10.83□□□□□ -0.68
CTSF-208ENST00000530565 WDR33Q9C0J8 1336 aaKnown RBP10.83□□□□□ -0.68
CTSF-208ENST00000530565 TNRC18O15417 2968 aaPredicted RBP10.82□□□□□ -0.68
CTSF-208ENST00000530565 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
CTSF-208ENST00000530565 IARSP41252 1262 aaKnown RBP10.82□□□□□ -0.68
CTSF-208ENST00000530565 CASP7P55210 303 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 DEFB115Q30KQ5 88 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 CLUAP1Q96AJ1 413 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 NLRP3Q96P20 1036 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 CLEC11AQ9Y240 323 aa10.82□□□□□ -0.68
CTSF-208ENST00000530565 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
CTSF-208ENST00000530565 GRM8O00222 908 aa10.81□□□□□ -0.68
CTSF-208ENST00000530565 HSP90B1P14625 803 aaKnown RBP10.81□□□□□ -0.68
CTSF-208ENST00000530565 FMR1Q06787 632 aaKnown RBP eCLIP10.81□□□□□ -0.68
CTSF-208ENST00000530565 CRY2Q49AN0 593 aa10.81□□□□□ -0.68
CTSF-208ENST00000530565 INTS3Q68E01 1043 aaKnown RBP10.81□□□□□ -0.68
CTSF-208ENST00000530565 PNMA8AQ86V59 439 aaPredicted RBP10.81□□□□□ -0.68
CTSF-208ENST00000530565 RTKN2Q8IZC4 609 aa10.81□□□□□ -0.68
CTSF-208ENST00000530565 GPC2Q8N158 579 aa10.81□□□□□ -0.68
CTSF-208ENST00000530565 C9orf78Q9NZ63 289 aaPredicted RBP10.81□□□□□ -0.68
CTSF-208ENST00000530565 PLIN1O60240 522 aa10.8□□□□□ -0.68
CTSF-208ENST00000530565 PDE8AO60658 829 aa10.8□□□□□ -0.68
CTSF-208ENST00000530565 FAM161AQ3B820 660 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms