RNA–Protein interactions for RNA: ENST00000530402.1

VPS26B-205, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-205ENST00000530402 TERTO14746 1132 aaKnown RBP10.12□□□□□ -0.79
VPS26B-205ENST00000530402 PHACTR2O75167 634 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 TNFRSF21O75509 655 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 IGHA2P01877 340 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 NFKB1P19838 968 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 DSC3Q14574 896 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 SNX29Q8TEQ0 813 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 FOXD3Q9UJU5 478 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-205ENST00000530402 HCN2Q9UL51 889 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 AMOTL2Q9Y2J4 779 aa10.12□□□□□ -0.79
VPS26B-205ENST00000530402 ATP2B2Q01814 1243 aa10.11□□□□□ -0.79
VPS26B-205ENST00000530402 FMR1Q06787 632 aaKnown RBP eCLIP10.11□□□□□ -0.79
VPS26B-205ENST00000530402 ORC1Q13415 861 aa10.11□□□□□ -0.79
VPS26B-205ENST00000530402 COL19A1Q14993 1142 aa10.11□□□□□ -0.79
VPS26B-205ENST00000530402 GIPC2Q8TF65 315 aa10.11□□□□□ -0.79
VPS26B-205ENST00000530402 NSFL1CQ9UNZ2 370 aaKnown RBP10.11□□□□□ -0.79
VPS26B-205ENST00000530402 PNMA6FA0A0J9YX94 578 aa10.1□□□□□ -0.79
VPS26B-205ENST00000530402 ZNF326Q5BKZ1 582 aaKnown RBP10.1□□□□□ -0.79
VPS26B-205ENST00000530402 GPR161Q8N6U8 529 aaKnown RBP10.1□□□□□ -0.79
VPS26B-205ENST00000530402 CSRNP1Q96S65 589 aa10.1□□□□□ -0.79
VPS26B-205ENST00000530402 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
VPS26B-205ENST00000530402 EFCC1Q9HA90 598 aa10.1□□□□□ -0.79
VPS26B-205ENST00000530402 CPNE3O75131 537 aaKnown RBP10.09□□□□□ -0.79
VPS26B-205ENST00000530402 LDHBP07195 334 aaKnown RBP10.09□□□□□ -0.79
VPS26B-205ENST00000530402 ZFATQ9P243 1243 aa10.09□□□□□ -0.79
VPS26B-205ENST00000530402 PHF20L1A8MW92 1017 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 EIF1AYO14602 144 aaKnown RBP10.08□□□□□ -0.8
VPS26B-205ENST00000530402 MMP20O60882 483 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 PSAPP07602 524 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 CES1P23141 567 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 RBM25P49756 843 aaKnown RBP10.08□□□□□ -0.8
VPS26B-205ENST00000530402 TBC1D8BQ0IIM8 1120 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 C1orf127Q8N9H9 656 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 IRF7Q92985 503 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 PMEPA1Q969W9 287 aa10.08□□□□□ -0.8
VPS26B-205ENST00000530402 FGD1P98174 961 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 GAS6Q14393 721 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 ENOX2Q16206 610 aaKnown RBP10.07□□□□□ -0.8
VPS26B-205ENST00000530402 SYT9Q86SS6 491 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
VPS26B-205ENST00000530402 BCL11AQ9H165 835 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 DNAJC25Q9H1X3 360 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 ZFYVE28Q9HCC9 887 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 MBIPQ9NS73 344 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 CNTN3Q9P232 1028 aa10.07□□□□□ -0.8
VPS26B-205ENST00000530402 C2CD2LO14523 706 aa10.06□□□□□ -0.8
VPS26B-205ENST00000530402 PCBP4P57723 403 aaKnown RBP10.06□□□□□ -0.8
VPS26B-205ENST00000530402 ZNF468Q5VIY5 522 aaPredicted RBP10.06□□□□□ -0.8
VPS26B-205ENST00000530402 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
VPS26B-205ENST00000530402 FBXO33Q7Z6M2 555 aa10.06□□□□□ -0.8
VPS26B-205ENST00000530402 RBM47A0AV96 593 aaKnown RBP10.05□□□□□ -0.8
VPS26B-205ENST00000530402 MAP3K6O95382 1288 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 MAP2K3P46734 347 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 ALG1LQ6GMV1 187 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 OR13H1Q8NG92 308 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 ZNF428Q96B54 188 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 UBE2OQ9C0C9 1292 aaKnown RBP10.05□□□□□ -0.8
VPS26B-205ENST00000530402 TLR7Q9NYK1 1049 aaKnown RBP10.05□□□□□ -0.8
VPS26B-205ENST00000530402 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 WWC3Q9ULE0 1092 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
VPS26B-205ENST00000530402 EREGO14944 169 aa10.04□□□□□ -0.8
VPS26B-205ENST00000530402 CYP2E1P05181 493 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 ZNF16P17020 682 aaPredicted RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 TAGLNQ01995 201 aaKnown RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 PLAURQ03405 335 aa10.04□□□□□ -0.8
VPS26B-205ENST00000530402 NFX1Q12986 1120 aaKnown RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
VPS26B-205ENST00000530402 NPM2Q86SE8 214 aaKnown RBP10.04□□□□□ -0.8
VPS26B-205ENST00000530402 PRPF40AO75400 957 aaKnown RBP10.03□□□□□ -0.8
VPS26B-205ENST00000530402 XPCQ01831 940 aaPredicted RBP10.03□□□□□ -0.8
VPS26B-205ENST00000530402 NCAPG2Q86XI2 1143 aa10.03□□□□□ -0.8
VPS26B-205ENST00000530402 SETDB2Q96T68 719 aa10.03□□□□□ -0.8
VPS26B-205ENST00000530402 CHRDQ9H2X0 955 aa10.03□□□□□ -0.8
VPS26B-205ENST00000530402 IGF1RP08069 1367 aa10.02□□□□□ -0.8
VPS26B-205ENST00000530402 ADH6P28332 368 aa10.02□□□□□ -0.81
VPS26B-205ENST00000530402 HYAL2Q12891 473 aa10.02□□□□□ -0.81
VPS26B-205ENST00000530402 RNFT1Q5M7Z0 435 aa10.02□□□□□ -0.81
VPS26B-205ENST00000530402 CCDC74AQ96AQ1 378 aa10.02□□□□□ -0.81
VPS26B-205ENST00000530402 NSUN5Q96P11 429 aaKnown RBP10.02□□□□□ -0.81
VPS26B-205ENST00000530402 NLRP2Q9NX02 1062 aa10.02□□□□□ -0.81
VPS26B-205ENST00000530402 SIN3BO75182 1162 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 ARAFP10398 606 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 SOX18P35713 384 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
VPS26B-205ENST00000530402 PCSK7Q16549 785 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 FBF1Q8TES7 1133 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 SPACA7Q96KW9 195 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 CNTNAP3BQ96NU0 1288 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
VPS26B-205ENST00000530402 CNTNAP3Q9BZ76 1288 aa10.01□□□□□ -0.81
VPS26B-205ENST00000530402 AVENQ9NQS1 362 aaPredicted RBP10.01□□□□□ -0.81
VPS26B-205ENST00000530402 NEURL1BA8MQ27 555 aa10□□□□□ -0.81
VPS26B-205ENST00000530402 EDN3P14138 238 aa10□□□□□ -0.81
VPS26B-205ENST00000530402 NRLP54845 237 aa10□□□□□ -0.81
VPS26B-205ENST00000530402 DNAJB12Q9NXW2 375 aaKnown RBP10□□□□□ -0.81
VPS26B-205ENST00000530402 GADD45BO75293 160 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms