RNA–Protein interactions for RNA: ENST00000530219.1

EIF3F-204, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

TSL 2

Gene EIF3F, Length 2,110 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-204ENST00000530219 GPATCH3Q96I76 525 aa12.94□□□□□ -0.34
EIF3F-204ENST00000530219 UPF3BQ9BZI7 483 aaKnown RBP12.94□□□□□ -0.34
EIF3F-204ENST00000530219 KAT6BQ8WYB5 2073 aa12.93□□□□□ -0.34
EIF3F-204ENST00000530219 ERBB3P21860 1342 aa12.93□□□□□ -0.34
EIF3F-204ENST00000530219 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
EIF3F-204ENST00000530219 CAVIN2O95810 425 aa12.93□□□□□ -0.34
EIF3F-204ENST00000530219 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
EIF3F-204ENST00000530219 PNMA6EA0A0J9YXQ4 647 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 HIP1O00291 1037 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
EIF3F-204ENST00000530219 HOXB7P09629 217 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 SYT1P21579 422 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 POLA2Q14181 598 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 SYCP1Q15431 976 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
EIF3F-204ENST00000530219 NLRP2Q9NX02 1062 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 SNX14Q9Y5W7 946 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
EIF3F-204ENST00000530219 ELP1O95163 1332 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 MAP3K19Q56UN5 1328 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 HSP90AB2PQ58FF8 381 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 TCHHQ07283 1943 aa12.92□□□□□ -0.34
EIF3F-204ENST00000530219 HCLS1P14317 486 aaPredicted RBP12.91□□□□□ -0.34
EIF3F-204ENST00000530219 KCNQ4P56696 695 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
EIF3F-204ENST00000530219 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 FUCA2Q9BTY2 467 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
EIF3F-204ENST00000530219 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 ZKSCAN1P17029 563 aaPredicted RBP12.91□□□□□ -0.34
EIF3F-204ENST00000530219 AK2P54819 239 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 ANKRD1Q15327 319 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 NOL8Q76FK4 1167 aaKnown RBP12.91□□□□□ -0.34
EIF3F-204ENST00000530219 ERC1Q8IUD2 1116 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 PRDM4Q9UKN5 801 aa12.91□□□□□ -0.34
EIF3F-204ENST00000530219 SURF6O75683 361 aaKnown RBP12.9□□□□□ -0.34
EIF3F-204ENST00000530219 KRT85P78386 507 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.9□□□□□ -0.34
EIF3F-204ENST00000530219 PI4K2BQ8TCG2 481 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 FAM200AQ8TCP9 573 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 KCNB2Q92953 911 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 USP44Q9H0E7 712 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 CYP46A1Q9Y6A2 500 aa12.9□□□□□ -0.34
EIF3F-204ENST00000530219 PSMA5P28066 241 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 DMTNQ08495 405 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 TAF7Q15545 349 aaPredicted RBP12.89□□□□□ -0.35
EIF3F-204ENST00000530219 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 FEZ1Q99689 392 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 GDPD2Q9HCC8 539 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 CHAMP1Q96JM3 812 aa12.89□□□□□ -0.35
EIF3F-204ENST00000530219 SCAND2PQ9GZW5 306 aaPredicted RBP12.89□□□□□ -0.35
EIF3F-204ENST00000530219 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 KIF20AO95235 890 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 MAP3K11Q16584 847 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 TSHZ3Q63HK5 1081 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 ZSWIM6Q9HCJ5 1215 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 HYPKQ9NX55 129 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 FIBPO43427 364 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 AMPHP49418 695 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 ALDH8A1Q9H2A2 487 aaPredicted RBP12.88□□□□□ -0.35
EIF3F-204ENST00000530219 TTC12Q9H892 705 aaPredicted RBP12.88□□□□□ -0.35
EIF3F-204ENST00000530219 DDX19AQ9NUU7 478 aaKnown RBP12.88□□□□□ -0.35
EIF3F-204ENST00000530219 CCNL1Q9UK58 526 aaPredicted RBP12.88□□□□□ -0.35
EIF3F-204ENST00000530219 MTMR6Q9Y217 621 aa12.88□□□□□ -0.35
EIF3F-204ENST00000530219 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
EIF3F-204ENST00000530219 COL13A1Q5TAT6 717 aaPredicted RBP12.87□□□□□ -0.35
EIF3F-204ENST00000530219 RNF20Q5VTR2 975 aa12.87□□□□□ -0.35
EIF3F-204ENST00000530219 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
EIF3F-204ENST00000530219 CLASRPQ8N2M8 674 aaKnown RBP12.87□□□□□ -0.35
EIF3F-204ENST00000530219 DDX54Q8TDD1 881 aaKnown RBP12.87□□□□□ -0.35
EIF3F-204ENST00000530219 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
EIF3F-204ENST00000530219 DOT1LQ8TEK3 1739 aa12.87□□□□□ -0.35
EIF3F-204ENST00000530219 LTN1O94822 1766 aa12.87□□□□□ -0.35
EIF3F-204ENST00000530219 CTIFO43310 598 aaKnown RBP12.86□□□□□ -0.35
EIF3F-204ENST00000530219 TOMM70O94826 608 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 GJB2P29033 226 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 MTX1Q13505 466 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
EIF3F-204ENST00000530219 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 NEMFO60524 1076 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 PRELPP51888 382 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 HDGFL1Q5TGJ6 251 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
EIF3F-204ENST00000530219 EVI5LQ96CN4 794 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 PAXBP1Q9Y5B6 917 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 WDR90Q96KV7 1748 aa12.86□□□□□ -0.35
EIF3F-204ENST00000530219 GOLGA6L4A6NEF3 574 aa12.85□□□□□ -0.35
EIF3F-204ENST00000530219 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
EIF3F-204ENST00000530219 EYA1Q99502 592 aa12.85□□□□□ -0.35
EIF3F-204ENST00000530219 FOXD4L6Q3SYB3 417 aaPredicted RBP12.85□□□□□ -0.35
EIF3F-204ENST00000530219 FOXD4L3Q6VB84 417 aaPredicted RBP12.85□□□□□ -0.35
EIF3F-204ENST00000530219 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms