RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 MYH14Q7Z406 1995 aaKnown RBP10.21□□□□□ -0.78
CMTM1-214ENST00000530141 KDM6AO15550 1401 aaPredicted RBP10.2□□□□□ -0.78
CMTM1-214ENST00000530141 GNAI2P04899 355 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 KCNA3P22001 575 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 CHRNA5P30532 468 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 NUCB1Q02818 461 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 FSTL1Q12841 308 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 ZNF790Q6PG37 636 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 FMNL2Q96PY5 1086 aa10.2□□□□□ -0.78
CMTM1-214ENST00000530141 IBTKQ9P2D0 1353 aaPredicted RBP10.19□□□□□ -0.78
CMTM1-214ENST00000530141 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 SNRPA1P09661 255 aaKnown RBP10.19□□□□□ -0.78
CMTM1-214ENST00000530141 G2E3Q7L622 706 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 CHD1LQ86WJ1 897 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 HS6ST3Q8IZP7 471 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 SRCIN1Q9C0H9 1055 aa10.19□□□□□ -0.78
CMTM1-214ENST00000530141 UPF2Q9HAU5 1272 aaKnown RBP10.19□□□□□ -0.78
CMTM1-214ENST00000530141 DDX21Q9NR30 783 aaKnown RBP eCLIP10.19□□□□□ -0.78
CMTM1-214ENST00000530141 ALDH1L1O75891 902 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 CEP85Q6P2H3 762 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 DNAAF4Q8WXU2 420 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 MS4A4AQ96JQ5 239 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 DCTPP1Q9H773 170 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 BOLA1Q9Y3E2 137 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
CMTM1-214ENST00000530141 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
CMTM1-214ENST00000530141 F6X3S4 739 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 KCNQ3O43525 872 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 UBTFL1P0CB47 393 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-214ENST00000530141 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 SMC1BQ8NDV3 1235 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 FBXO22Q8NEZ5 403 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 SMARCC1Q92922 1105 aaPredicted RBP10.17□□□□□ -0.78
CMTM1-214ENST00000530141 SLC4A9Q96Q91 983 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 MFRPQ9BY79 579 aa10.17□□□□□ -0.78
CMTM1-214ENST00000530141 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.17□□□□□ -0.78
CMTM1-214ENST00000530141 SRP68Q9UHB9 627 aaKnown RBP10.17□□□□□ -0.78
CMTM1-214ENST00000530141 MKRN1Q9UHC7 482 aaKnown RBP10.17□□□□□ -0.78
CMTM1-214ENST00000530141 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
CMTM1-214ENST00000530141 FOXN1O15353 648 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 GYS1P13807 737 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 TGFB2P61812 414 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 C8orf34Q49A92 452 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 ANKRD45Q5TZF3 282 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 KSR2Q6VAB6 950 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 SLAIN1Q8ND83 568 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 MEIS3Q99687 375 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 C1orf115Q9H7X2 142 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 CCDC87Q9NVE4 849 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 AFDNP55196 1824 aaKnown RBP10.16□□□□□ -0.78
CMTM1-214ENST00000530141 TJP1Q07157 1748 aa10.16□□□□□ -0.78
CMTM1-214ENST00000530141 POTEMA6NI47 508 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 G3V3G9 751 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 ATP8B2P98198 1209 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 DDR1Q08345 913 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 NEXNQ0ZGT2 675 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 ARHGEF1Q92888 912 aaKnown RBP10.15□□□□□ -0.78
CMTM1-214ENST00000530141 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
CMTM1-214ENST00000530141 ATG3Q9NT62 314 aa10.15□□□□□ -0.78
CMTM1-214ENST00000530141 CACNA1SQ13698 1873 aa10.15□□□□□ -0.79
CMTM1-214ENST00000530141 DLEC1Q9Y238 1755 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 PI4KAP2A4QPH2 592 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 HSP90AB4PQ58FF6 505 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 ERICH6Q7L0X2 663 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 SIRT2Q8IXJ6 389 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 PI4KAP1Q8N8J0 262 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 IPO9Q96P70 1041 aaKnown RBP10.14□□□□□ -0.79
CMTM1-214ENST00000530141 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
CMTM1-214ENST00000530141 LNPKQ9C0E8 428 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 PHAXQ9H814 394 aaKnown RBP10.14□□□□□ -0.79
CMTM1-214ENST00000530141 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
CMTM1-214ENST00000530141 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 SLC39A6Q13433 755 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 DALRD3Q5D0E6 543 aaKnown RBP10.13□□□□□ -0.79
CMTM1-214ENST00000530141 BMP2KLQ5H9B9 411 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 BEND3Q5T5X7 828 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 SKAP1Q86WV1 359 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 LINS1Q8NG48 757 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 ZNF496Q96IT1 587 aaPredicted RBP10.13□□□□□ -0.79
CMTM1-214ENST00000530141 PIM2Q9P1W9 311 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 RTCBQ9Y3I0 505 aaKnown RBP10.13□□□□□ -0.79
CMTM1-214ENST00000530141 PARP3Q9Y6F1 533 aa10.13□□□□□ -0.79
CMTM1-214ENST00000530141 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
CMTM1-214ENST00000530141 TRAPPC3LQ5T215 181 aa10.12□□□□□ -0.79
CMTM1-214ENST00000530141 POTEGQ6S5H5 508 aa10.12□□□□□ -0.79
CMTM1-214ENST00000530141 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
CMTM1-214ENST00000530141 MAP3K2Q9Y2U5 619 aa10.12□□□□□ -0.79
CMTM1-214ENST00000530141 COL11A2P13942 1736 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-214ENST00000530141 POTECB2RU33 542 aa10.11□□□□□ -0.79
CMTM1-214ENST00000530141 RFC4P35249 363 aa10.11□□□□□ -0.79
CMTM1-214ENST00000530141 USP44Q9H0E7 712 aa10.11□□□□□ -0.79
CMTM1-214ENST00000530141 C9orf78Q9NZ63 289 aaPredicted RBP10.11□□□□□ -0.79
CMTM1-214ENST00000530141 CARMIL3Q8ND23 1372 aa10.11□□□□□ -0.79
CMTM1-214ENST00000530141 ZNF831Q5JPB2 1677 aa10.1□□□□□ -0.79
CMTM1-214ENST00000530141 PDIA6Q15084 440 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms