RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 LAMB2P55268 1798 aa13.04□□□□□ -0.32
PDZD3-211ENST00000529573 ANKRD36CQ5JPF3 1778 aa13.04□□□□□ -0.32
PDZD3-211ENST00000529573 CCDC85CA6NKD9 419 aa13.03□□□□□ -0.32
PDZD3-211ENST00000529573 HIRAP54198 1017 aaPredicted RBP13.03□□□□□ -0.32
PDZD3-211ENST00000529573 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
PDZD3-211ENST00000529573 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
PDZD3-211ENST00000529573 NLRP10Q86W26 655 aa13.03□□□□□ -0.32
PDZD3-211ENST00000529573 MPNDQ8N594 471 aa13.03□□□□□ -0.32
PDZD3-211ENST00000529573 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
PDZD3-211ENST00000529573 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
PDZD3-211ENST00000529573 RAD17O75943 681 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 ANXA1P04083 346 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
PDZD3-211ENST00000529573 EIF2S2P20042 333 aaKnown RBP13.02□□□□□ -0.33
PDZD3-211ENST00000529573 TNIP1Q15025 636 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 BABAM1Q9NWV8 329 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 MAPK8IP3Q9UPT6 1336 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 DUOX1Q9NRD9 1551 aa13.02□□□□□ -0.33
PDZD3-211ENST00000529573 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
PDZD3-211ENST00000529573 GRAPQ13588 217 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
PDZD3-211ENST00000529573 CDC37L1Q7L3B6 337 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 COPS6Q7L5N1 327 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 GRAPLQ8TC17 118 aaPredicted RBP13.01□□□□□ -0.33
PDZD3-211ENST00000529573 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 BCL2L13Q9BXK5 485 aa13.01□□□□□ -0.33
PDZD3-211ENST00000529573 LRRC37AA6NMS7 1700 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 SH3TC1Q8TE82 1336 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 TCIRG1Q13488 830 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 TMC4Q7Z404 712 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
PDZD3-211ENST00000529573 CASP8AP2Q9UKL3 1982 aa13□□□□□ -0.33
PDZD3-211ENST00000529573 TAF1P21675 1872 aa12.99□□□□□ -0.33
PDZD3-211ENST00000529573 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
PDZD3-211ENST00000529573 DPF2Q92785 391 aa12.99□□□□□ -0.33
PDZD3-211ENST00000529573 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
PDZD3-211ENST00000529573 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
PDZD3-211ENST00000529573 TRMT112Q9UI30 125 aaKnown RBP12.99□□□□□ -0.33
PDZD3-211ENST00000529573 H7C1D1 291 aa12.98□□□□□ -0.33
PDZD3-211ENST00000529573 RIPK4P57078 832 aa12.98□□□□□ -0.33
PDZD3-211ENST00000529573 AIMP1Q12904 312 aaKnown RBP12.98□□□□□ -0.33
PDZD3-211ENST00000529573 NOGQ13253 232 aa12.98□□□□□ -0.33
PDZD3-211ENST00000529573 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
PDZD3-211ENST00000529573 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
PDZD3-211ENST00000529573 USP48Q86UV5 1035 aa12.97□□□□□ -0.33
PDZD3-211ENST00000529573 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
PDZD3-211ENST00000529573 ZIC5Q96T25 663 aa12.97□□□□□ -0.33
PDZD3-211ENST00000529573 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
PDZD3-211ENST00000529573 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
PDZD3-211ENST00000529573 PSMD14O00487 310 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 HUNKP57058 714 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 LMOD3Q0VAK6 560 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.33
PDZD3-211ENST00000529573 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 DLK2Q6UY11 383 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 SAMD7Q7Z3H4 446 aa12.96□□□□□ -0.33
PDZD3-211ENST00000529573 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 FAM155AB1AL88 458 aaPredicted RBP12.95□□□□□ -0.34
PDZD3-211ENST00000529573 CHL1O00533 1208 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 EGFRP00533 1210 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 PLBD2Q8NHP8 589 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 CELF1Q92879 486 aaKnown RBP12.95□□□□□ -0.34
PDZD3-211ENST00000529573 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 COL4A1P02462 1669 aa12.95□□□□□ -0.34
PDZD3-211ENST00000529573 RPS12P25398 132 aaKnown RBP12.94□□□□□ -0.34
PDZD3-211ENST00000529573 DGKZQ13574 1117 aa12.94□□□□□ -0.34
PDZD3-211ENST00000529573 TBC1D10BQ4KMP7 808 aaPredicted RBP12.94□□□□□ -0.34
PDZD3-211ENST00000529573 RGMBQ6NW40 437 aa12.94□□□□□ -0.34
PDZD3-211ENST00000529573 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
PDZD3-211ENST00000529573 CHPF2Q9P2E5 772 aa12.94□□□□□ -0.34
PDZD3-211ENST00000529573 NSFL1CQ9UNZ2 370 aaKnown RBP12.94□□□□□ -0.34
PDZD3-211ENST00000529573 POLR2AP24928 1970 aaKnown RBP12.94□□□□□ -0.34
PDZD3-211ENST00000529573 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
PDZD3-211ENST00000529573 GPSM2P81274 684 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 ANKRD13DQ6ZTN6 518 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 GBA2Q9HCG7 927 aaPredicted RBP12.93□□□□□ -0.34
PDZD3-211ENST00000529573 KCNQ5Q9NR82 932 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
PDZD3-211ENST00000529573 ADM5C9JUS6 153 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 RIMBP2O15034 1052 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 ECE2O60344 883 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 HOXB7P09629 217 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 TRIM28Q13263 835 aaKnown RBP12.92□□□□□ -0.34
PDZD3-211ENST00000529573 C2orf69Q8N8R5 385 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
PDZD3-211ENST00000529573 SCN9AQ15858 1988 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 ATP5J2-PTCD1G3V325 749 aa12.91□□□□□ -0.34
PDZD3-211ENST00000529573 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
PDZD3-211ENST00000529573 KIF23Q02241 960 aaPredicted RBP12.91□□□□□ -0.34
PDZD3-211ENST00000529573 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms