RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 FAM161AQ3B820 660 aa14.33□□□□□ -0.12
CAPN1-217ENST00000529133 CCDC85AQ96PX6 553 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-217ENST00000529133 KIF13BQ9NQT8 1826 aa14.33□□□□□ -0.12
CAPN1-217ENST00000529133 RTL9Q8NET4 1388 aa14.33□□□□□ -0.12
CAPN1-217ENST00000529133 CCDC152Q4G0S7 254 aa14.32□□□□□ -0.12
CAPN1-217ENST00000529133 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
CAPN1-217ENST00000529133 C2CD5Q86YS7 1000 aa14.32□□□□□ -0.12
CAPN1-217ENST00000529133 GREM2Q9H772 168 aa14.32□□□□□ -0.12
CAPN1-217ENST00000529133 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
CAPN1-217ENST00000529133 CHRNA5P30532 468 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 PPP1R1BQ9UD71 204 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-217ENST00000529133 PDZRN3Q9UPQ7 1066 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 PCDHB15Q9Y5E8 787 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 KIAA1551Q9HCM1 1747 aa14.31□□□□□ -0.12
CAPN1-217ENST00000529133 COL4A1P02462 1669 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 PNMA6EA0A0J9YXQ4 647 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 SRGNP10124 158 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 NPR1P16066 1061 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 HOXA10P31260 410 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-217ENST00000529133 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 RPAP2Q8IXW5 612 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-217ENST00000529133 RPGRQ92834 1020 aaKnown RBP14.3□□□□□ -0.12
CAPN1-217ENST00000529133 SEC31BQ9NQW1 1179 aa14.3□□□□□ -0.12
CAPN1-217ENST00000529133 H0YIN7 160 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 SRGAP3O43295 1099 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 DPEP1P16444 411 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 ITGA6P23229 1130 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 RFX5P48382 616 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-217ENST00000529133 TGFB2P61812 414 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 SIRT2Q8IXJ6 389 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 MASTLQ96GX5 879 aa14.29□□□□□ -0.12
CAPN1-217ENST00000529133 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
CAPN1-217ENST00000529133 FHDC1Q9C0D6 1143 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-217ENST00000529133 ANKRD18BA2A2Z9 1011 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 MYH3P11055 1940 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
CAPN1-217ENST00000529133 POLA2Q14181 598 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 CCDC57Q2TAC2 916 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 DDX46Q7L014 1031 aaKnown RBP14.28□□□□□ -0.12
CAPN1-217ENST00000529133 NLGN2Q8NFZ4 835 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 SSH3Q8TE77 659 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 CRAMP1Q96RY5 1269 aa14.28□□□□□ -0.12
CAPN1-217ENST00000529133 DLEC1Q9Y238 1755 aa14.27□□□□□ -0.12
CAPN1-217ENST00000529133 A0A0G2JLW4 131 aa14.27□□□□□ -0.13
CAPN1-217ENST00000529133 GRAPQ13588 217 aa14.27□□□□□ -0.13
CAPN1-217ENST00000529133 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
CAPN1-217ENST00000529133 GRAPLQ8TC17 118 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-217ENST00000529133 CELF1Q92879 486 aaKnown RBP14.27□□□□□ -0.13
CAPN1-217ENST00000529133 ZNF622Q969S3 477 aaKnown RBP eCLIP14.27□□□□□ -0.13
CAPN1-217ENST00000529133 CDC5LQ99459 802 aaKnown RBP14.27□□□□□ -0.13
CAPN1-217ENST00000529133 HMMRO75330 724 aa14.26□□□□□ -0.13
CAPN1-217ENST00000529133 KCNA3P22001 575 aa14.26□□□□□ -0.13
CAPN1-217ENST00000529133 ZNF594Q96JF6 807 aaPredicted RBP14.26□□□□□ -0.13
CAPN1-217ENST00000529133 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
CAPN1-217ENST00000529133 TAF7LQ5H9L4 462 aa14.25□□□□□ -0.13
CAPN1-217ENST00000529133 ERICH6BQ5W0A0 696 aa14.25□□□□□ -0.13
CAPN1-217ENST00000529133 ANKRD18AQ8IVF6 992 aa14.25□□□□□ -0.13
CAPN1-217ENST00000529133 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
CAPN1-217ENST00000529133 COPRSQ9NQ92 184 aa14.25□□□□□ -0.13
CAPN1-217ENST00000529133 PA2G4Q9UQ80 394 aaKnown RBP14.25□□□□□ -0.13
CAPN1-217ENST00000529133 ALDH1B1P30837 517 aa14.24□□□□□ -0.13
CAPN1-217ENST00000529133 IGHMBP2P38935 993 aaKnown RBP14.24□□□□□ -0.13
CAPN1-217ENST00000529133 RPS8P62241 208 aaKnown RBP14.24□□□□□ -0.13
CAPN1-217ENST00000529133 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
CAPN1-217ENST00000529133 PRPF40BQ6NWY9 871 aaKnown RBP14.24□□□□□ -0.13
CAPN1-217ENST00000529133 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
CAPN1-217ENST00000529133 PPEF1O14829 653 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-217ENST00000529133 BBOX1O75936 387 aa14.23□□□□□ -0.13
CAPN1-217ENST00000529133 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
CAPN1-217ENST00000529133 TTLL6Q8N841 843 aa14.23□□□□□ -0.13
CAPN1-217ENST00000529133 PUS3Q9BZE2 481 aaKnown RBP14.23□□□□□ -0.13
CAPN1-217ENST00000529133 SIL1Q9H173 461 aa14.23□□□□□ -0.13
CAPN1-217ENST00000529133 PIM2Q9P1W9 311 aa14.23□□□□□ -0.13
CAPN1-217ENST00000529133 EYA2O00167 538 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 CIAO1O76071 339 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 LRRC24Q50LG9 513 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 LDHAL6AQ6ZMR3 332 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 MPHOSPH8Q99549 860 aa14.22□□□□□ -0.13
CAPN1-217ENST00000529133 BSDC1Q9NW68 430 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-217ENST00000529133 NOP58Q9Y2X3 529 aaKnown RBP14.22□□□□□ -0.13
CAPN1-217ENST00000529133 LRRC37AA6NMS7 1700 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 TAF1P21675 1872 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 SURF6O75683 361 aaKnown RBP14.21□□□□□ -0.13
CAPN1-217ENST00000529133 IGHDP01880 384 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 DALRD3Q5D0E6 543 aaKnown RBP14.21□□□□□ -0.13
CAPN1-217ENST00000529133 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 RWDD1Q9H446 243 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-217ENST00000529133 CNNM1Q9NRU3 951 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 FBXO3Q9UK99 471 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 WWC3Q9ULE0 1092 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 ATP6V0A2Q9Y487 856 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 RIPOR2Q9Y4F9 1068 aa14.21□□□□□ -0.13
CAPN1-217ENST00000529133 BRCA1P38398 1863 aaKnown RBP14.21□□□□□ -0.14
CAPN1-217ENST00000529133 SPEF2Q9C093 1822 aa14.2□□□□□ -0.14
CAPN1-217ENST00000529133 SP8Q8IXZ3 490 aa14.2□□□□□ -0.14
CAPN1-217ENST00000529133 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms