RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RBM46	Q8TBY0	533 aa	Known RBP	15.05	■□□□□ -0
PSMC3-205	ENST00000528362	CELF1	Q92879	486 aa	Known RBP	15.05	■□□□□ -0
PSMC3-205	ENST00000528362	RTFDC1	Q9BY42	306 aa	Predicted RBP	15.05	■□□□□ -0
PSMC3-205	ENST00000528362	COL4A5	P29400	1685 aa		15.04	■□□□□ -0
PSMC3-205	ENST00000528362		E9PSI1	815 aa		15.04	■□□□□ -0
PSMC3-205	ENST00000528362	FZD9	O00144	591 aa		15.04	■□□□□ -0
PSMC3-205	ENST00000528362	HSP90B1	P14625	803 aa	Known RBP	15.04	■□□□□ -0
PSMC3-205	ENST00000528362	DNAAF4	Q8WXU2	420 aa		15.04	■□□□□ -0
PSMC3-205	ENST00000528362	TMX4	Q9H1E5	349 aa	Predicted RBP	15.04	■□□□□ -0
PSMC3-205	ENST00000528362	CACNA1S	Q13698	1873 aa		15.03	■□□□□ -0
PSMC3-205	ENST00000528362	CDHR2	Q9BYE9	1310 aa		15.03	■□□□□ -0
PSMC3-205	ENST00000528362	PDE8A	O60658	829 aa		15.03	■□□□□ -0
PSMC3-205	ENST00000528362	DPP8	Q6V1X1	898 aa	Predicted RBP	15.03	■□□□□ -0
PSMC3-205	ENST00000528362	TMC4	Q7Z404	712 aa		15.03	■□□□□ -0
PSMC3-205	ENST00000528362	L3MBTL3	Q96JM7	780 aa	Predicted RBP	15.03	■□□□□ -0
PSMC3-205	ENST00000528362	COL4A1	P02462	1669 aa		15.03	■□□□□ -0
PSMC3-205	ENST00000528362	SLFN5	Q08AF3	891 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	AOC3	Q16853	763 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	IFFO2	Q5TF58	517 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	LARGE2	Q8N3Y3	721 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	MPND	Q8N594	471 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	JDP2	Q8WYK2	163 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	SEC31B	Q9NQW1	1179 aa		15.02	■□□□□ -0
PSMC3-205	ENST00000528362	DDX60	Q8IY21	1712 aa	Known RBP	15.02	□□□□□ -0.01
PSMC3-205	ENST00000528362		F6X3S4	739 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362		H7C1W4	665 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	PPIP5K2	O43314	1243 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	CTSW	P56202	376 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	FSTL1	Q12841	308 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	GCKR	Q14397	625 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	CCDC152	Q4G0S7	254 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	DIEXF	Q68CQ4	756 aa	Known RBP	15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	SUPT20H	Q8NEM7	779 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	LINS1	Q8NG48	757 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	CDCA7L	Q96GN5	454 aa		15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	CCDC85A	Q96PX6	553 aa	Predicted RBP	15.01	□□□□□ -0.01
PSMC3-205	ENST00000528362	WDR90	Q96KV7	1748 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	CASP7	P55210	303 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	RPS8	P62241	208 aa	Known RBP	15	□□□□□ -0.01
PSMC3-205	ENST00000528362	UBE3B	Q7Z3V4	1068 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	NIM1K	Q8IY84	436 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	MIER1	Q8N108	512 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	VPS33B	Q9H267	617 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	LAMB2	P55268	1798 aa		15	□□□□□ -0.01
PSMC3-205	ENST00000528362	DUOX1	Q9NRD9	1551 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	GPSM2	P81274	684 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	KIAA2012	Q0VF49	1180 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	BEND3	Q5T5X7	828 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	GPC2	Q8N158	579 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	SMC1B	Q8NDV3	1235 aa		14.99	□□□□□ -0.01
PSMC3-205	ENST00000528362	IQCA1L	A6NCM1	817 aa		14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	EIF6	P56537	245 aa	Known RBP	14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	TRMT2A	Q8IZ69	625 aa	Known RBP	14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	TTLL11	Q8NHH1	800 aa		14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	TAF1D	Q9H5J8	278 aa	Predicted RBP	14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	GREM2	Q9H772	168 aa		14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	NSFL1C	Q9UNZ2	370 aa	Known RBP	14.98	□□□□□ -0.01
PSMC3-205	ENST00000528362	POTEI	P0CG38	1075 aa		14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	POTEJ	P0CG39	1038 aa		14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	MRPL50	Q8N5N7	158 aa	Known RBP	14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	PLA2G12B	Q9BX93	195 aa		14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	POLL	Q9UGP5	575 aa		14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	DICER1	Q9UPY3	1922 aa	Known RBP	14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	RTL9	Q8NET4	1388 aa		14.97	□□□□□ -0.01
PSMC3-205	ENST00000528362	LRRC37A	A6NMS7	1700 aa		14.96	□□□□□ -0.01
PSMC3-205	ENST00000528362	ANKRD18A	Q8IVF6	992 aa		14.96	□□□□□ -0.01
PSMC3-205	ENST00000528362	HACL1	Q9UJ83	578 aa		14.96	□□□□□ -0.01
PSMC3-205	ENST00000528362	ZNRF3	Q9ULT6	936 aa		14.96	□□□□□ -0.01
PSMC3-205	ENST00000528362	GJA3	Q9Y6H8	435 aa		14.96	□□□□□ -0.01
PSMC3-205	ENST00000528362	CCDC88A	Q3V6T2	1871 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	SCNN1D	P51172	638 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	APLP1	P51693	650 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	CXCL9	Q07325	125 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	TBC1D16	Q8TBP0	767 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	SSH1	Q8WYL5	1049 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	CDC5L	Q99459	802 aa	Known RBP	14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	PODXL2	Q9NZ53	605 aa		14.95	□□□□□ -0.02
PSMC3-205	ENST00000528362	YDJC	A8MPS7	323 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	C6orf229	H3BNL8	230 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	CSF1R	P07333	972 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	EPHX2	P34913	555 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	WASHC4	Q2M389	1173 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	FAM161A	Q3B820	660 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	SLC4A10	Q6U841	1118 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	GPR101	Q96P66	508 aa	Predicted RBP	14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	BCL2L13	Q9BXK5	485 aa		14.94	□□□□□ -0.02
PSMC3-205	ENST00000528362	ALDH1L1	O75891	902 aa		14.93	□□□□□ -0.02
PSMC3-205	ENST00000528362	UFL1	O94874	794 aa		14.93	□□□□□ -0.02
PSMC3-205	ENST00000528362	CHADL	Q6NUI6	762 aa		14.93	□□□□□ -0.02
PSMC3-205	ENST00000528362	LDHD	Q86WU2	507 aa		14.93	□□□□□ -0.02
PSMC3-205	ENST00000528362	ANKIB1	Q9P2G1	1089 aa		14.93	□□□□□ -0.02
PSMC3-205	ENST00000528362	GRM8	O00222	908 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	RIMBP2	O15034	1052 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	RAD17	O75943	681 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	ITGA6	P23229	1130 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	EPS15	P42566	896 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	HTRA3	P83110	453 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	FOXO4	P98177	505 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	EYA3	Q99504	573 aa		14.92	□□□□□ -0.02
PSMC3-205	ENST00000528362	SRCIN1	Q9C0H9	1055 aa		14.92	□□□□□ -0.02

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms