RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 GRM5P41594 1212 aa7.94□□□□□ -1.14
LINC01001-202ENST00000527683 C1QTNF8P60827 252 aa7.94□□□□□ -1.14
LINC01001-202ENST00000527683 NME9Q86XW9 330 aa7.94□□□□□ -1.14
LINC01001-202ENST00000527683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC01001-202ENST00000527683 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
LINC01001-202ENST00000527683 KLF16Q9BXK1 252 aaPredicted RBP7.94□□□□□ -1.14
LINC01001-202ENST00000527683 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
LINC01001-202ENST00000527683 CPSF1Q10570 1443 aaKnown RBP7.94□□□□□ -1.14
LINC01001-202ENST00000527683 NRKQ7Z2Y5 1582 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 ANP32CO43423 234 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 GPR37L1O60883 481 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 ZNF827Q17R98 1081 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 ZNF787Q6DD87 383 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 MPNDQ8N594 471 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 CDK15Q96Q40 435 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 CARD11Q9BXL7 1154 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 SLC12A5Q9H2X9 1139 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 SLIT3O75094 1523 aa7.93□□□□□ -1.14
LINC01001-202ENST00000527683 CCER2I3L3R5 266 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 AXIN1O15169 862 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 NR3C2P08235 984 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 KCNQ4P56696 695 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 GPR162Q16538 588 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 DDX54Q8TDD1 881 aaKnown RBP7.92□□□□□ -1.14
LINC01001-202ENST00000527683 ANKRD24Q8TF21 1146 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 SLC16A10Q8TF71 515 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 GMPR2Q9P2T1 348 aaKnown RBP7.92□□□□□ -1.14
LINC01001-202ENST00000527683 USP31Q70CQ4 1352 aa7.92□□□□□ -1.14
LINC01001-202ENST00000527683 KTN1Q86UP2 1357 aaKnown RBP7.92□□□□□ -1.14
LINC01001-202ENST00000527683 CTC1Q2NKJ3 1217 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 SLC27A3Q5K4L6 730 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 IP6K1Q92551 441 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 FKBPLQ9UIM3 349 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 KIF7Q2M1P5 1343 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 PHRF1Q9P1Y6 1649 aaKnown RBP7.91□□□□□ -1.14
LINC01001-202ENST00000527683 PEAK1Q9H792 1746 aa7.91□□□□□ -1.14
LINC01001-202ENST00000527683 ARHGEF28Q8N1W1 1705 aaKnown RBP7.9□□□□□ -1.14
LINC01001-202ENST00000527683 MAP3K5Q99683 1374 aa7.9□□□□□ -1.14
LINC01001-202ENST00000527683 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
LINC01001-202ENST00000527683 FBLN1P23142 703 aa7.9□□□□□ -1.14
LINC01001-202ENST00000527683 TMC1Q8TDI8 760 aa7.9□□□□□ -1.14
LINC01001-202ENST00000527683 NUP188Q5SRE5 1749 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 RREB1Q92766 1687 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 SBNO2Q9Y2G9 1366 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 PNPLA7Q6ZV29 1317 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 NNTQ13423 1086 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 ERFEQ4G0M1 354 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 TRIM46Q7Z4K8 759 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 BPHLQ86WA6 291 aaPredicted RBP7.89□□□□□ -1.15
LINC01001-202ENST00000527683 FAM174AQ8TBP5 190 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
LINC01001-202ENST00000527683 ATP13A2Q9NQ11 1180 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 SNRKQ9NRH2 765 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 TFCP2L1Q9NZI6 479 aa7.89□□□□□ -1.15
LINC01001-202ENST00000527683 MAGEB6P1A0A0J9YX57 407 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 POLD1P28340 1107 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 ARID5BQ14865 1188 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 AGERQ15109 404 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 HDGFL2Q7Z4V5 671 aaPredicted RBP7.88□□□□□ -1.15
LINC01001-202ENST00000527683 NLGN2Q8NFZ4 835 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 PUS7Q96PZ0 661 aaKnown RBP7.88□□□□□ -1.15
LINC01001-202ENST00000527683 CARD14Q9BXL6 1004 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 COL18A1P39060 1754 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 PARP4Q9UKK3 1724 aaKnown RBP7.88□□□□□ -1.15
LINC01001-202ENST00000527683 TOPAZ1Q8N9V7 1692 aa7.88□□□□□ -1.15
LINC01001-202ENST00000527683 TNS2Q63HR2 1409 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 ADH1CP00326 375 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 BMP1P13497 986 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 SNRPBP14678 240 aaKnown RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 TIMP2P16035 220 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 YBX3P16989 372 aaKnown RBP eCLIP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 TMEM259Q4ZIN3 620 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 COL23A1Q86Y22 540 aaPredicted RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 TRMT44Q8IYL2 757 aaKnown RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 MTMR14Q8NCE2 650 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 ARMC2Q8NEN0 867 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 ZCRB1Q8TBF4 217 aaKnown RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 ZNF775Q96BV0 537 aaPredicted RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 SYTL4Q96C24 671 aaPredicted RBP7.87□□□□□ -1.15
LINC01001-202ENST00000527683 TERF2IPQ9NYB0 399 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 WASF2Q9Y6W5 498 aa7.87□□□□□ -1.15
LINC01001-202ENST00000527683 ITSN1Q15811 1721 aa7.86□□□□□ -1.15
LINC01001-202ENST00000527683 ST20-MTHFSA0A0A6YYL1 179 aa7.86□□□□□ -1.15
LINC01001-202ENST00000527683 GRIN3BO60391 1043 aa7.86□□□□□ -1.15
LINC01001-202ENST00000527683 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
LINC01001-202ENST00000527683 NFAT5O94916 1531 aa7.86□□□□□ -1.15
LINC01001-202ENST00000527683 MAP3K19Q56UN5 1328 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 CASZ1Q86V15 1759 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 GIGYF1O75420 1035 aaPredicted RBP7.85□□□□□ -1.15
LINC01001-202ENST00000527683 HOXC9P31274 260 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 NBPF6Q5VWK0 638 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
LINC01001-202ENST00000527683 ITPKCQ96DU7 683 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 NBPF4Q96M43 638 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 CCNL1Q9UK58 526 aaPredicted RBP7.85□□□□□ -1.15
LINC01001-202ENST00000527683 CD163L1Q9NR16 1453 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 QRICH2Q9H0J4 1663 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 LRRC37A3O60309 1634 aa7.85□□□□□ -1.15
LINC01001-202ENST00000527683 MYOM1P52179 1685 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms