RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 DDX46Q7L014 1031 aaKnown RBP13.17□□□□□ -0.3
UBQLN1-204ENST00000527373 MASTLQ96GX5 879 aa13.17□□□□□ -0.3
UBQLN1-204ENST00000527373 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
UBQLN1-204ENST00000527373 MEIS3Q99687 375 aa13.17□□□□□ -0.3
UBQLN1-204ENST00000527373 PIM2Q9P1W9 311 aa13.17□□□□□ -0.3
UBQLN1-204ENST00000527373 GNAI3P08754 354 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 SRGNP10124 158 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 NPR1P16066 1061 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 CASP7P55210 303 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 CTSWP56202 376 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 HDAC5Q9UQL6 1122 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
UBQLN1-204ENST00000527373 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 CHRDL2Q6WN34 429 aa13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 TTLL6Q8N841 843 aa13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 CNKSR1Q969H4 720 aa13.15□□□□□ -0.3
UBQLN1-204ENST00000527373 KLRG2A4D1S0 409 aaPredicted RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 KCNA3P22001 575 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 MVPQ14764 893 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 GPR162Q16538 588 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 DALRD3Q5D0E6 543 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 EPHA10Q5JZY3 1008 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 STYK1Q6J9G0 422 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 LMBR1LQ6UX01 489 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 TTLL11Q8NHH1 800 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 PLA2G12BQ9BX93 195 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 DDX19BQ9UMR2 479 aa13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
UBQLN1-204ENST00000527373 UTYO14607 1347 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 KIF13BQ9NQT8 1826 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 TNRC6CQ9HCJ0 1690 aaKnown RBP13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 GNAI2P04899 355 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 FOXO4P98177 505 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 TAF7LQ5H9L4 462 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 GREM2Q9H772 168 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 SEC31BQ9NQW1 1179 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 RIC1Q4ADV7 1423 aa13.13□□□□□ -0.31
UBQLN1-204ENST00000527373 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
UBQLN1-204ENST00000527373 FAM161AQ3B820 660 aa13.12□□□□□ -0.31
UBQLN1-204ENST00000527373 CRAMP1Q96RY5 1269 aa13.12□□□□□ -0.31
UBQLN1-204ENST00000527373 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
UBQLN1-204ENST00000527373 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 ITGA6P23229 1130 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 HOXA10P31260 410 aaPredicted RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 IFIT5Q13325 482 aaKnown RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 GRAPQ13588 217 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 PRPF40BQ6NWY9 871 aaKnown RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 GRAPLQ8TC17 118 aaPredicted RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 KAZALD1Q96I82 304 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 CRBNQ96SW2 442 aa13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 CDC5LQ99459 802 aaKnown RBP13.11□□□□□ -0.31
UBQLN1-204ENST00000527373 LAMB2P55268 1798 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 MYH3P11055 1940 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 C21orf2O43822 256 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 BBOX1O75936 387 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 CSF1RP07333 972 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 CELF1Q92879 486 aaKnown RBP13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
UBQLN1-204ENST00000527373 CACNA1SQ13698 1873 aa13.09□□□□□ -0.31
UBQLN1-204ENST00000527373 ANKRD44Q8N8A2 993 aa13.09□□□□□ -0.31
UBQLN1-204ENST00000527373 MPHOSPH8Q99549 860 aa13.09□□□□□ -0.31
UBQLN1-204ENST00000527373 TAF1P21675 1872 aa13.08□□□□□ -0.32
UBQLN1-204ENST00000527373 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
UBQLN1-204ENST00000527373 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
UBQLN1-204ENST00000527373 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
UBQLN1-204ENST00000527373 SLX4Q8IY92 1834 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 ZBTB22O15209 634 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 RABL6Q3YEC7 729 aaPredicted RBP13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 OLFM4Q6UX06 510 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 CNNM1Q9NRU3 951 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
UBQLN1-204ENST00000527373 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 CCDC93Q567U6 631 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 SOGA3Q5TF21 947 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 LDHAL6AQ6ZMR3 332 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 SP8Q8IXZ3 490 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 KLHDC4Q8TBB5 520 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 ZBTB40Q9NUA8 1239 aa13.06□□□□□ -0.32
UBQLN1-204ENST00000527373 ATP6V0A2Q9Y487 856 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms