RNA–Protein interactions for RNA: ENST00000527141.5

CTSF-205, Transcript of cathepsin F, humanhuman

TSL 2

Gene CTSF, Length 1,856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-205ENST00000527141 GREM2Q9H772 168 aa18.37■□□□□ 0.53
CTSF-205ENST00000527141 PPP4R2Q9NY27 417 aa18.37■□□□□ 0.53
CTSF-205ENST00000527141 GTF2E1P29083 439 aaPredicted RBP18.36■□□□□ 0.53
CTSF-205ENST00000527141 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
CTSF-205ENST00000527141 MYH3P11055 1940 aa18.35■□□□□ 0.53
CTSF-205ENST00000527141 KLRG2A4D1S0 409 aaPredicted RBP18.35■□□□□ 0.53
CTSF-205ENST00000527141 SRGAP3O43295 1099 aa18.35■□□□□ 0.53
CTSF-205ENST00000527141 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
CTSF-205ENST00000527141 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
CTSF-205ENST00000527141 PA2G4Q9UQ80 394 aaKnown RBP18.35■□□□□ 0.53
CTSF-205ENST00000527141 HDAC1Q13547 482 aaPredicted RBP18.35■□□□□ 0.53
CTSF-205ENST00000527141 RIC1Q4ADV7 1423 aa18.34■□□□□ 0.53
CTSF-205ENST00000527141 TAF1P21675 1872 aa18.34■□□□□ 0.53
CTSF-205ENST00000527141 SLC51AQ86UW1 340 aa18.34■□□□□ 0.53
CTSF-205ENST00000527141 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
CTSF-205ENST00000527141 PTPN12Q05209 780 aaKnown RBP18.33■□□□□ 0.53
CTSF-205ENST00000527141 CRY2Q49AN0 593 aa18.33■□□□□ 0.53
CTSF-205ENST00000527141 KDM2BQ8NHM5 1336 aa18.33■□□□□ 0.52
CTSF-205ENST00000527141 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
CTSF-205ENST00000527141 ST5P78524 1137 aa18.32■□□□□ 0.52
CTSF-205ENST00000527141 NLRP3Q96P20 1036 aa18.32■□□□□ 0.52
CTSF-205ENST00000527141 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
CTSF-205ENST00000527141 CHMP3Q9Y3E7 222 aa18.32■□□□□ 0.52
CTSF-205ENST00000527141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
CTSF-205ENST00000527141 C10orf71Q711Q0 1435 aa18.31■□□□□ 0.52
CTSF-205ENST00000527141 ITGA6P23229 1130 aa18.31■□□□□ 0.52
CTSF-205ENST00000527141 NPHP1O15259 732 aa18.31■□□□□ 0.52
CTSF-205ENST00000527141 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
CTSF-205ENST00000527141 DCTPP1Q9H773 170 aa18.31■□□□□ 0.52
CTSF-205ENST00000527141 GOLGB1Q14789 3259 aaKnown RBP18.3■□□□□ 0.52
CTSF-205ENST00000527141 CELF1Q92879 486 aaKnown RBP18.3■□□□□ 0.52
CTSF-205ENST00000527141 RTL9Q8NET4 1388 aa18.3■□□□□ 0.52
CTSF-205ENST00000527141 COL11A2P13942 1736 aaPredicted RBP18.3■□□□□ 0.52
CTSF-205ENST00000527141 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
CTSF-205ENST00000527141 COPRSQ9NQ92 184 aa18.29■□□□□ 0.52
CTSF-205ENST00000527141 EXOC6BQ9Y2D4 811 aa18.29■□□□□ 0.52
CTSF-205ENST00000527141 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
CTSF-205ENST00000527141 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
CTSF-205ENST00000527141 RWDD1Q9H446 243 aaPredicted RBP18.29■□□□□ 0.52
CTSF-205ENST00000527141 NOP58Q9Y2X3 529 aaKnown RBP18.29■□□□□ 0.52
CTSF-205ENST00000527141 SRGNP10124 158 aa18.28■□□□□ 0.52
CTSF-205ENST00000527141 CHRNA5P30532 468 aa18.28■□□□□ 0.52
CTSF-205ENST00000527141 ATG9AQ7Z3C6 839 aa18.28■□□□□ 0.52
CTSF-205ENST00000527141 SMC5Q8IY18 1101 aa18.28■□□□□ 0.52
CTSF-205ENST00000527141 KIF13BQ9NQT8 1826 aa18.28■□□□□ 0.52
CTSF-205ENST00000527141 HOXA10P31260 410 aaPredicted RBP18.27■□□□□ 0.52
CTSF-205ENST00000527141 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
CTSF-205ENST00000527141 SIL1Q9H173 461 aa18.27■□□□□ 0.52
CTSF-205ENST00000527141 KIAA1551Q9HCM1 1747 aa18.27■□□□□ 0.52
CTSF-205ENST00000527141 KCNA3P22001 575 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 POLD1P28340 1107 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 CCDC57Q2TAC2 916 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 SKAP1Q86WV1 359 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 SURF6O75683 361 aaKnown RBP18.26■□□□□ 0.51
CTSF-205ENST00000527141 SASH1O94885 1247 aa18.26■□□□□ 0.51
CTSF-205ENST00000527141 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
CTSF-205ENST00000527141 LRP5O75197 1615 aa18.25■□□□□ 0.51
CTSF-205ENST00000527141 HMMRO75330 724 aa18.25■□□□□ 0.51
CTSF-205ENST00000527141 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
CTSF-205ENST00000527141 PDE6BP35913 854 aa18.24■□□□□ 0.51
CTSF-205ENST00000527141 C2CD5Q86YS7 1000 aa18.24■□□□□ 0.51
CTSF-205ENST00000527141 A0A0G2JLW4 131 aa18.24■□□□□ 0.51
CTSF-205ENST00000527141 EYA2O00167 538 aa18.23■□□□□ 0.51
CTSF-205ENST00000527141 SMARCA5O60264 1052 aaPredicted RBP18.23■□□□□ 0.51
CTSF-205ENST00000527141 DPEP1P16444 411 aa18.23■□□□□ 0.51
CTSF-205ENST00000527141 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
CTSF-205ENST00000527141 WTIPA6NIX2 430 aaPredicted RBP18.22■□□□□ 0.51
CTSF-205ENST00000527141 APBB1O00213 710 aa18.22■□□□□ 0.51
CTSF-205ENST00000527141 RPS8P62241 208 aaKnown RBP18.22■□□□□ 0.51
CTSF-205ENST00000527141 GRAPQ13588 217 aa18.22■□□□□ 0.51
CTSF-205ENST00000527141 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
CTSF-205ENST00000527141 GRAPLQ8TC17 118 aaPredicted RBP18.22■□□□□ 0.51
CTSF-205ENST00000527141 CRAMP1Q96RY5 1269 aa18.22■□□□□ 0.51
CTSF-205ENST00000527141 NPR1P16066 1061 aa18.22■□□□□ 0.51
CTSF-205ENST00000527141 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
CTSF-205ENST00000527141 RPGRQ92834 1020 aaKnown RBP18.22■□□□□ 0.51
CTSF-205ENST00000527141 OLFM4Q6UX06 510 aa18.21■□□□□ 0.51
CTSF-205ENST00000527141 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.51
CTSF-205ENST00000527141 MASTLQ96GX5 879 aa18.21■□□□□ 0.51
CTSF-205ENST00000527141 RBM17Q96I25 401 aaKnown RBP18.21■□□□□ 0.51
CTSF-205ENST00000527141 H0YIN7 160 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 SNAP23O00161 211 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 VGLL2Q8N8G2 317 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 RHPN1Q8TCX5 695 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 GCC1Q96CN9 775 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
CTSF-205ENST00000527141 PDZRN3Q9UPQ7 1066 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 SLX4Q8IY92 1834 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 CIAO1O76071 339 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 TFCP2Q12800 502 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
CTSF-205ENST00000527141 HELBQ8NG08 1087 aaPredicted RBP18.2■□□□□ 0.5
CTSF-205ENST00000527141 ZNF622Q969S3 477 aaKnown RBP eCLIP18.2■□□□□ 0.5
CTSF-205ENST00000527141 CDC5LQ99459 802 aaKnown RBP18.2■□□□□ 0.5
CTSF-205ENST00000527141 MINPP1Q9UNW1 487 aa18.2■□□□□ 0.5
CTSF-205ENST00000527141 NUCB1Q02818 461 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms