RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 RPS6KB1P23443 525 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 CASP7P55210 303 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 CHRNA2Q15822 529 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 TPCN1Q9ULQ1 816 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 ST3GAL1Q11201 340 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 TFCP2Q12800 502 aa12.88□□□□□ -0.35
PTPMT1-204ENST00000527079 ZNF500O60304 480 aaPredicted RBP12.87□□□□□ -0.35
PTPMT1-204ENST00000527079 ZNF589Q86UQ0 364 aaPredicted RBP12.87□□□□□ -0.35
PTPMT1-204ENST00000527079 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
PTPMT1-204ENST00000527079 HAUS7Q99871 368 aa12.87□□□□□ -0.35
PTPMT1-204ENST00000527079 FIBPO43427 364 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 LARP1BQ659C4 914 aaKnown RBP12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 UBR2Q8IWV8 1755 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 PCDH11XQ9BZA7 1347 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 PCDH11YQ9BZA8 1340 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 ZKSCAN5Q9Y2L8 839 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 ATP5J2-PTCD1G3V325 749 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 H7C1W4 665 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 OFD1O75665 1012 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 PIP4K2AP48426 406 aaPredicted RBP12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 NECAB1Q8N987 351 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 GPR108Q9NPR9 543 aa12.86□□□□□ -0.35
PTPMT1-204ENST00000527079 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 DNM1Q05193 864 aaKnown RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 TOB2Q14106 344 aaPredicted RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 JARID2Q92833 1246 aaPredicted RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 CWC25Q9NXE8 425 aaPredicted RBP12.85□□□□□ -0.35
PTPMT1-204ENST00000527079 ELP1O95163 1332 aa12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 KRT85P78386 507 aa12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 FOXO4P98177 505 aa12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 EDC3Q96F86 508 aaKnown RBP12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
PTPMT1-204ENST00000527079 NBPF26B4DH59 902 aa12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 TPM2P07951 284 aa12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 NBPF14Q5TI25 921 aa12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 NBPF10Q6P3W6 841 aaKnown RBP12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 NBPF15Q8N660 670 aa12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.35
PTPMT1-204ENST00000527079 ZNF609O15014 1411 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 PAPPAQ13219 1627 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 PALLDQ8WX93 1383 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 TERF1P54274 439 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 NKX1-1Q15270 411 aaPredicted RBP12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 NEK1Q96PY6 1258 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
PTPMT1-204ENST00000527079 TJP1Q07157 1748 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 IL15P40933 162 aaPredicted RBP12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 TAF6LQ9Y6J9 622 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 ATG9AQ7Z3C6 839 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 SCAND2PQ9GZW5 306 aaPredicted RBP12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 HELLSQ9NRZ9 838 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 SPEF2Q9C093 1822 aa12.82□□□□□ -0.36
PTPMT1-204ENST00000527079 COL9A3Q14050 684 aaPredicted RBP12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 CDC37L1Q7L3B6 337 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 GTF3C6Q969F1 213 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 TCEANC2Q96MN5 208 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 FUCA2Q9BTY2 467 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 CIAO1O76071 339 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 TTLL7Q6ZT98 887 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 PAG1Q9NWQ8 432 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
PTPMT1-204ENST00000527079 EYA2O00167 538 aa12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 CYP21A2P08686 494 aa12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 XIRP1Q702N8 1843 aaKnown RBP12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 COL5A2P05997 1499 aaPredicted RBP12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
PTPMT1-204ENST00000527079 BRINP3Q76B58 766 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 IL2RBP14784 551 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 Q6ZUG5 572 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 LLPHQ9BRT6 129 aaKnown RBP12.79□□□□□ -0.36
PTPMT1-204ENST00000527079 CARD10Q9BWT7 1032 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms