RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 LMO7Q8WWI1 1683 aa14.32□□□□□ -0.12
CHMP1B-201ENST00000526991 RUFY2Q8WXA3 655 aa14.32□□□□□ -0.12
CHMP1B-201ENST00000526991 R3HCC1Q9Y3T6 440 aaKnown RBP14.32□□□□□ -0.12
CHMP1B-201ENST00000526991 KDM3BQ7LBC6 1761 aa14.32□□□□□ -0.12
CHMP1B-201ENST00000526991 KIF1AQ12756 1690 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 ME3Q16798 604 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 CYP46A1Q9Y6A2 500 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 FOSBP53539 338 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 LMBR1LQ6UX01 489 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 DNAJC10Q8IXB1 793 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 DNAJC2Q99543 621 aaKnown RBP14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 METTL22Q9BUU2 404 aaPredicted RBP14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 HEG1Q9ULI3 1381 aa14.31□□□□□ -0.12
CHMP1B-201ENST00000526991 ALDH1L1O75891 902 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 HCLS1P14317 486 aaPredicted RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 KCNQ4P56696 695 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 CREB3L3Q68CJ9 461 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 TMOD3Q9NYL9 352 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 TTC41PQ6P2S7 1318 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 CCDC129Q6ZRS4 1044 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 USP25Q9UHP3 1055 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 PCDH11XQ9BZA7 1347 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 PCDH11YQ9BZA8 1340 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 XIRP1Q702N8 1843 aaKnown RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 PXDNLA1KZ92 1463 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 ZKSCAN1P17029 563 aaPredicted RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 EVI5LQ96CN4 794 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 NEUROD6Q96NK8 337 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 TPCN1Q9ULQ1 816 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 STRCQ7RTU9 1775 aa14.3□□□□□ -0.12
CHMP1B-201ENST00000526991 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 TFCP2Q12800 502 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 SEC62Q99442 399 aaKnown RBP14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 CCDC171Q6TFL3 1326 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 PHRF1Q9P1Y6 1649 aaKnown RBP14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 F13A1P00488 732 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 ST3GAL1Q11201 340 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 IPO4Q8TEX9 1081 aaKnown RBP14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 PIGBQ92521 554 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
CHMP1B-201ENST00000526991 SMIM5Q71RC9 77 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 LRP10Q7Z4F1 713 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 SECISBP2LQ93073 1101 aaKnown RBP14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 SYAP1Q96A49 352 aaPredicted RBP14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 CACNA1FO60840 1977 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 MTX1Q13505 466 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 ERC1Q8IUD2 1116 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 TFIP11Q9UBB9 837 aaKnown RBP14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 COL5A2P05997 1499 aaPredicted RBP14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 C5P01031 1676 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 C17orf53Q8N3J3 647 aaPredicted RBP14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 DCCP43146 1447 aa14.28□□□□□ -0.12
CHMP1B-201ENST00000526991 SLC27A2O14975 620 aa14.27□□□□□ -0.12
CHMP1B-201ENST00000526991 TIMM10P62072 90 aa14.27□□□□□ -0.12
CHMP1B-201ENST00000526991 CAMK4Q16566 473 aa14.27□□□□□ -0.12
CHMP1B-201ENST00000526991 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.12
CHMP1B-201ENST00000526991 NECTIN1Q15223 517 aa14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 DDX46Q7L014 1031 aaKnown RBP14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 PDLIM2Q96JY6 352 aa14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 CARD10Q9BWT7 1032 aa14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 MTMR6Q9Y217 621 aa14.27□□□□□ -0.13
CHMP1B-201ENST00000526991 TCHHQ07283 1943 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 TBC1D2BQ9UPU7 963 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 COL18A1P39060 1754 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 CDC37L1Q7L3B6 337 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 DBNDD2Q9BQY9 259 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 DDX11Q96FC9 970 aa14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 PUS3Q9BZE2 481 aaKnown RBP14.26□□□□□ -0.13
CHMP1B-201ENST00000526991 OVOS2A0A0G2JMS6 1433 aa14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 CPDO75976 1380 aa14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 VPS53Q5VIR6 699 aa14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 NOL7Q9UMY1 257 aaKnown RBP14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 BLOC1S2Q6QNY1 142 aa14.25□□□□□ -0.13
CHMP1B-201ENST00000526991 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 TTC12Q9H892 705 aaPredicted RBP14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 USP42Q9H9J4 1324 aaKnown RBP14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 CEBPZQ03701 1054 aaKnown RBP14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 CCDC183Q5T5S1 534 aa14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 SNRKQ9NRH2 765 aa14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 ZKSCAN5Q9Y2L8 839 aa14.24□□□□□ -0.13
CHMP1B-201ENST00000526991 HLFQ16534 295 aa14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 PLBD2Q8NHP8 589 aa14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 JAK2O60674 1132 aa14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 OFD1O75665 1012 aa14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 PHF14O94880 888 aa14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 HSP90B1P14625 803 aaKnown RBP14.23□□□□□ -0.13
CHMP1B-201ENST00000526991 UBE2HP62256 183 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms