RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 CABP1Q9NZU7 370 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 CLTCQ00610 1675 aaKnown RBP8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 TRPM1Q7Z4N2 1603 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 SPATA31D1Q6ZQQ2 1576 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 NRXN1Q9ULB1 1477 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 KIF1BO60333 1816 aa8.64□□□□□ -1.03
ATPAF1-208ENST00000526821 IFT172Q9UG01 1749 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 MROH2AA6NES4 1674 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 MADDQ8WXG6 1647 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 GPR25O00155 361 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 MTFR1Q15390 333 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 FIGNL1Q6PIW4 674 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 LARGE2Q8N3Y3 721 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 CFHR5Q9BXR6 569 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 ZNF358Q9NW07 568 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 MKRN1Q9UHC7 482 aaKnown RBP8.63□□□□□ -1.03
ATPAF1-208ENST00000526821 LAMC1P11047 1609 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 RPGRIP1LQ68CZ1 1315 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 ADAMTS2O95450 1211 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 MX2P20592 715 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 LORP23490 312 aaPredicted RBP8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 IDI1Q13907 227 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 MLECQ14165 292 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 OGFOD1Q8N543 542 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 RUBCNLQ9H714 662 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
ATPAF1-208ENST00000526821 ZMYM3Q14202 1370 aa8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 ZNF326Q5BKZ1 582 aaKnown RBP8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 CRISPLD1Q9H336 500 aa8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 GJA3Q9Y6H8 435 aa8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 USP47Q96K76 1375 aa8.61□□□□□ -1.03
ATPAF1-208ENST00000526821 CFAP65Q6ZU64 1925 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 GAS6Q14393 721 aa8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 ARSJQ5FYB0 599 aaPredicted RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 LARP1Q6PKG0 1096 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 HIRIP3Q9BW71 556 aaPredicted RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 ZDHHC3Q9NYG2 299 aa8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 TMEM131LA2VDJ0 1609 aa8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 PPLO60437 1756 aa8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 KIAA1210Q9ULL0 1709 aa8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 ROCK2O75116 1388 aaKnown RBP8.6□□□□□ -1.03
ATPAF1-208ENST00000526821 ARID4BQ4LE39 1312 aaPredicted RBP8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 RASA1P20936 1047 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 MAP2K3P46734 347 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 CARD11Q9BXL7 1154 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 ATXN7L1Q9ULK2 861 aaPredicted RBP8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 MAFBQ9Y5Q3 323 aaPredicted RBP8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 ZFYVE9O95405 1425 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 NEXMIFQ5QGS0 1516 aa8.59□□□□□ -1.03
ATPAF1-208ENST00000526821 ADGRF5Q8IZF2 1346 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 PIK3C2GO75747 1445 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 M0R2N6 131 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 CLDN10P78369 228 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 BICDL1Q6ZP65 573 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 IQSEC3Q9UPP2 1182 aaPredicted RBP8.58□□□□□ -1.04
ATPAF1-208ENST00000526821 WASHC2AQ641Q2 1341 aa8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 SIX5Q8N196 739 aa8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 ZNF594Q96JF6 807 aaPredicted RBP8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 NEUROD4Q9HD90 331 aa8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 A2ML1A8K2U0 1454 aa8.57□□□□□ -1.04
ATPAF1-208ENST00000526821 TEAD4Q15561 434 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 SLC9A9Q8IVB4 645 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 VRTNQ9H8Y1 702 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 CCDC7Q96M83 1385 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 KDM5AP29375 1690 aaKnown RBP8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 IQGAP1P46940 1657 aa8.56□□□□□ -1.04
ATPAF1-208ENST00000526821 ST20-MTHFSA0A0A6YYL1 179 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 ZBTB7BO15156 539 aaPredicted RBP8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 ATP4AP20648 1035 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 SEC13P55735 322 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 TNS4Q8IZW8 715 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 C14orf93Q9H972 538 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 ADAMTS8Q9UP79 889 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 KIAA1024Q9UPX6 916 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 TNRQ92752 1358 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 FER1L4A9Z1Z3 1794 aa8.55□□□□□ -1.04
ATPAF1-208ENST00000526821 POLR1AO95602 1720 aaPredicted RBP8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 MYO5BQ9ULV0 1848 aa8.54□□□□□ -1.04
ATPAF1-208ENST00000526821 C3P01024 1663 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms