RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 CCDC183Q5T5S1 534 aa24.36■■□□□ 1.49
SMIM3-201ENST00000526627 NBPF26B4DH59 902 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 RPS6KB1P23443 525 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 NBPF14Q5TI25 921 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 USPL1Q5W0Q7 1092 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 NBPF10Q6P3W6 841 aaKnown RBP24.35■■□□□ 1.49
SMIM3-201ENST00000526627 CADPS2Q86UW7 1296 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 NBPF15Q8N660 670 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 FIBPO43427 364 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 DNM1Q05193 864 aaKnown RBP24.35■■□□□ 1.49
SMIM3-201ENST00000526627 RNF20Q5VTR2 975 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 BLOC1S2Q6QNY1 142 aa24.35■■□□□ 1.49
SMIM3-201ENST00000526627 TOB2Q14106 344 aaPredicted RBP24.34■■□□□ 1.49
SMIM3-201ENST00000526627 TCEANC2Q96MN5 208 aa24.34■■□□□ 1.49
SMIM3-201ENST00000526627 DBNDD2Q9BQY9 259 aa24.34■■□□□ 1.49
SMIM3-201ENST00000526627 NDUFB9Q9Y6M9 179 aa24.34■■□□□ 1.49
SMIM3-201ENST00000526627 MSNP26038 577 aaKnown RBP24.34■■□□□ 1.49
SMIM3-201ENST00000526627 CHGBP05060 677 aa24.33■■□□□ 1.49
SMIM3-201ENST00000526627 HMG20BQ9P0W2 317 aa24.33■■□□□ 1.49
SMIM3-201ENST00000526627 ZNF609O15014 1411 aa24.33■■□□□ 1.48
SMIM3-201ENST00000526627 RFX7Q2KHR2 1363 aa24.33■■□□□ 1.48
SMIM3-201ENST00000526627 FOXO4P98177 505 aa24.33■■□□□ 1.48
SMIM3-201ENST00000526627 H7C1W4 665 aa24.32■■□□□ 1.48
SMIM3-201ENST00000526627 LMBR1LQ6UX01 489 aa24.32■■□□□ 1.48
SMIM3-201ENST00000526627 HAUS7Q99871 368 aa24.32■■□□□ 1.48
SMIM3-201ENST00000526627 ANKRD1Q15327 319 aa24.31■■□□□ 1.48
SMIM3-201ENST00000526627 VPS37CA5D8V6 355 aaPredicted RBP24.3■■□□□ 1.48
SMIM3-201ENST00000526627 UBR2Q8IWV8 1755 aa24.3■■□□□ 1.48
SMIM3-201ENST00000526627 NUP188Q5SRE5 1749 aa24.3■■□□□ 1.48
SMIM3-201ENST00000526627 TTLL7Q6ZT98 887 aa24.3■■□□□ 1.48
SMIM3-201ENST00000526627 ZNF500O60304 480 aaPredicted RBP24.29■■□□□ 1.48
SMIM3-201ENST00000526627 ZKSCAN5Q9Y2L8 839 aa24.29■■□□□ 1.48
SMIM3-201ENST00000526627 TJP1Q07157 1748 aa24.29■■□□□ 1.48
SMIM3-201ENST00000526627 OFD1O75665 1012 aa24.29■■□□□ 1.48
SMIM3-201ENST00000526627 TPRNQ4KMQ1 711 aa24.29■■□□□ 1.48
SMIM3-201ENST00000526627 LARP1BQ659C4 914 aaKnown RBP24.29■■□□□ 1.48
SMIM3-201ENST00000526627 CDC37L1Q7L3B6 337 aa24.29■■□□□ 1.48
SMIM3-201ENST00000526627 LETM1O95202 739 aaPredicted RBP24.28■■□□□ 1.48
SMIM3-201ENST00000526627 CCDC129Q6ZRS4 1044 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 ATG9AQ7Z3C6 839 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 SEC62Q99442 399 aaKnown RBP24.28■■□□□ 1.48
SMIM3-201ENST00000526627 DNAJC2Q99543 621 aaKnown RBP24.28■■□□□ 1.48
SMIM3-201ENST00000526627 CSPP1Q1MSJ5 1256 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 FAM184AQ8NB25 1140 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 FUCA2Q9BTY2 467 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 KCPQ6ZWJ8 1503 aa24.28■■□□□ 1.48
SMIM3-201ENST00000526627 UVSSAQ2YD98 709 aa24.27■■□□□ 1.48
SMIM3-201ENST00000526627 CCDC39Q9UFE4 941 aa24.27■■□□□ 1.48
SMIM3-201ENST00000526627 WDR17Q8IZU2 1322 aa24.27■■□□□ 1.48
SMIM3-201ENST00000526627 PCDH11XQ9BZA7 1347 aa24.26■■□□□ 1.47
SMIM3-201ENST00000526627 PCDH11YQ9BZA8 1340 aa24.26■■□□□ 1.47
SMIM3-201ENST00000526627 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
SMIM3-201ENST00000526627 ZCRB1Q8TBF4 217 aaKnown RBP24.26■■□□□ 1.47
SMIM3-201ENST00000526627 PDIA4P13667 645 aaKnown RBP24.26■■□□□ 1.47
SMIM3-201ENST00000526627 KRT32Q14532 448 aa24.26■■□□□ 1.47
SMIM3-201ENST00000526627 MCMDC2Q4G0Z9 681 aa24.26■■□□□ 1.47
SMIM3-201ENST00000526627 PAPPAQ13219 1627 aa24.25■■□□□ 1.47
SMIM3-201ENST00000526627 XIRP1Q702N8 1843 aaKnown RBP24.25■■□□□ 1.47
SMIM3-201ENST00000526627 A1BGP04217 495 aa24.25■■□□□ 1.47
SMIM3-201ENST00000526627 CWC25Q9NXE8 425 aaPredicted RBP24.25■■□□□ 1.47
SMIM3-201ENST00000526627 MCM5P33992 734 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 BRINP3Q76B58 766 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 TTC6Q86TZ1 520 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 KBTBD3Q8NAB2 608 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 U3KPZ7 1027 aaPredicted RBP24.24■■□□□ 1.47
SMIM3-201ENST00000526627 ERVV-2B6SEH9 535 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 CYP21A2P08686 494 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 PDCP20941 246 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 NEK1Q96PY6 1258 aa24.24■■□□□ 1.47
SMIM3-201ENST00000526627 HCLS1P14317 486 aaPredicted RBP24.23■■□□□ 1.47
SMIM3-201ENST00000526627 NKX1-1Q15270 411 aaPredicted RBP24.23■■□□□ 1.47
SMIM3-201ENST00000526627 FERMT3Q86UX7 667 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 CHMP3Q9Y3E7 222 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 STK3Q13188 491 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 FAM173BQ6P4H8 233 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 GIMAP6Q6P9H5 292 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 SH3TC1Q8TE82 1336 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 PALLDQ8WX93 1383 aa24.23■■□□□ 1.47
SMIM3-201ENST00000526627 GPR108Q9NPR9 543 aa24.22■■□□□ 1.47
SMIM3-201ENST00000526627 TOM1L2Q6ZVM7 507 aa24.22■■□□□ 1.47
SMIM3-201ENST00000526627 PRDM11Q9NQV5 511 aa24.22■■□□□ 1.47
SMIM3-201ENST00000526627 SHANK3Q9BYB0 1731 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 COL5A2P05997 1499 aaPredicted RBP24.21■■□□□ 1.47
SMIM3-201ENST00000526627 KRT85P78386 507 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 GTF3C6Q969F1 213 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 CCDC9Q9Y3X0 531 aaKnown RBP24.21■■□□□ 1.47
SMIM3-201ENST00000526627 TIMM10P62072 90 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 SLFNL1Q499Z3 407 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.21■■□□□ 1.47
SMIM3-201ENST00000526627 ELP1O95163 1332 aa24.21■■□□□ 1.47
SMIM3-201ENST00000526627 TNS2Q63HR2 1409 aa24.2■■□□□ 1.47
SMIM3-201ENST00000526627 STOX1Q6ZVD7 989 aa24.2■■□□□ 1.46
SMIM3-201ENST00000526627 ZBTB3Q9H5J0 574 aa24.2■■□□□ 1.46
SMIM3-201ENST00000526627 USP25Q9UHP3 1055 aa24.2■■□□□ 1.46
SMIM3-201ENST00000526627 LRRC24Q50LG9 513 aa24.19■■□□□ 1.46
SMIM3-201ENST00000526627 Q6ZUG5 572 aa24.19■■□□□ 1.46
SMIM3-201ENST00000526627 CCDC191Q8NCU4 936 aa24.19■■□□□ 1.46
SMIM3-201ENST00000526627 JAK2O60674 1132 aa24.19■■□□□ 1.46
SMIM3-201ENST00000526627 IL15P40933 162 aaPredicted RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms