RNA–Protein interactions for RNA: ENST00000526262.5

PPFIA1-206, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 4,537 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-206ENST00000526262 C6orf229H3BNL8 230 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 MCMDC2Q4G0Z9 681 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 CCDC83Q8IWF9 413 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 DBNDD2Q9BQY9 259 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 UBAC1Q9BSL1 405 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 SH2B1Q9NRF2 756 aaPredicted RBP10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 ITSN1Q15811 1721 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 CRB1P82279 1406 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 IQSEC2Q5JU85 1478 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 MARCH6O60337 910 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 TRPC5Q9UL62 973 aaPredicted RBP10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 MCM4P33991 863 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 NMIQ13287 307 aaPredicted RBP10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 ZBTB1Q9Y2K1 713 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 RBM8AQ9Y5S9 174 aaKnown RBP10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 MINDY4BA8MYZ0 360 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 KDM4AO75164 1064 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 USP26Q9BXU7 913 aa10.45□□□□□ -0.74
PPFIA1-206ENST00000526262 FIBPO43427 364 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 MBD3O95983 291 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 IQSEC3Q9UPP2 1182 aaPredicted RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 MAP3K15Q6ZN16 1313 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 PDIA4P13667 645 aaKnown RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 IL6STP40189 918 aaPredicted RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 IBTKQ9P2D0 1353 aaPredicted RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 MST1RQ04912 1400 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 MSNP26038 577 aaKnown RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 SLC9C2Q5TAH2 1124 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 GIGYF2Q6Y7W6 1299 aaKnown RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 TRIM22Q8IYM9 498 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 IFT172Q9UG01 1749 aa10.44□□□□□ -0.74
PPFIA1-206ENST00000526262 ZBTB38Q8NAP3 1195 aaPredicted RBP10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 NUP133Q8WUM0 1156 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 NEK1Q96PY6 1258 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 TPM4P67936 248 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 CCDC73Q6ZRK6 1079 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 QTRT2Q9H974 415 aaKnown RBP10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 PCCAP05165 728 aaPredicted RBP10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 RBM5P52756 815 aaKnown RBP eCLIP10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 SNX21Q969T3 373 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 CRKLP46109 303 aaKnown RBP10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 HAND2P61296 217 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 BRMS1Q9HCU9 246 aa10.43□□□□□ -0.74
PPFIA1-206ENST00000526262 CDKL5O76039 1030 aa10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 USP5P45974 858 aa10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 DDX11Q96FC9 970 aa10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 COL3A1P02461 1466 aaPredicted RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 GSPT1P15170 499 aaKnown RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 CAVIN1Q6NZI2 390 aaKnown RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 EAF2Q96CJ1 260 aaPredicted RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 MAP2P11137 1827 aaKnown RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 MYOM1P52179 1685 aa10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 RNF113AO15541 343 aaKnown RBP10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 COPRSQ9NQ92 184 aa10.42□□□□□ -0.74
PPFIA1-206ENST00000526262 NRKQ7Z2Y5 1582 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 KRT85P78386 507 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 CNBD1Q8NA66 436 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 ZNF622Q969S3 477 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■□□□ 12.5
PPFIA1-206ENST00000526262 TMX3Q96JJ7 454 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 RNF41Q9H4P4 317 aaPredicted RBP10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 RAD50Q92878 1312 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 SPTY2D1Q68D10 685 aaPredicted RBP10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 XAGE2Q96GT9 111 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 LDHCP07864 332 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 PUM3Q15397 648 aaKnown RBP10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 FAM182BQ5T319 152 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 ZNF396Q96N95 335 aaPredicted RBP10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 ATG3Q9NT62 314 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 CTSWP56202 376 aa10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 ZNF219Q9P2Y4 722 aaPredicted RBP10.41□□□□□ -0.74
PPFIA1-206ENST00000526262 BECN2A8MW95 431 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 CYP7A1P22680 504 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 NSFL1CQ9UNZ2 370 aaKnown RBP10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 SGSM2O43147 1006 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 ATP2B1P20020 1258 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
PPFIA1-206ENST00000526262 POLR3DP05423 398 aaPredicted RBP10.4□□□□□ -0.75
PPFIA1-206ENST00000526262 TCEANC2Q96MN5 208 aa10.4□□□□□ -0.75
PPFIA1-206ENST00000526262 ZNF287Q9HBT7 754 aa10.4□□□□□ -0.75
PPFIA1-206ENST00000526262 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.75
PPFIA1-206ENST00000526262 GOLGA6L19H0YKK7 550 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 ATP5JP18859 108 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 FERMT3Q86UX7 667 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 ZSCAN29Q8IWY8 852 aaPredicted RBP10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 NCOA7Q8NI08 942 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 RANBP6O60518 1105 aaKnown RBP10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 IGKV5-2P06315 115 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 IQCA1Q86XH1 822 aa10.39□□□□□ -0.75
PPFIA1-206ENST00000526262 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms