RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 CAGE1Q8TC20 777 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 EAF2Q96CJ1 260 aaPredicted RBP8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 DBNDD2Q9BQY9 259 aa8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 UTP14AQ9BVJ6 771 aaKnown RBP8.09□□□□□ -1.12
TGFBR3-207ENST00000525962 KLF18A0A0U1RQI7 1052 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 KRT222Q8N1A0 295 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF594Q96JF6 807 aaPredicted RBP8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 PUF60Q9UHX1 559 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 MAP3K4Q9Y6R4 1608 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 GRM8O00222 908 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 NCBP3Q53F19 620 aaKnown RBP8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 CNNM1Q9NRU3 951 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 HYPKQ9NX55 129 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 MAST1Q9Y2H9 1570 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 VPS53Q5VIR6 699 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 SUCLG2Q96I99 432 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 LZTFL1Q9NQ48 299 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 ST7Q9NRC1 585 aa8.08□□□□□ -1.12
TGFBR3-207ENST00000525962 NPHP3Q7Z494 1330 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 PIK3R4Q99570 1358 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 FAM170AA1A519 330 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 DDIT3P35638 169 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 CABP4P57796 275 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF589Q86UQ0 364 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 NFATC2IPQ8NCF5 419 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 MYL10Q9BUA6 226 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 NPATQ14207 1427 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 TRPM1Q7Z4N2 1603 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 COBLO75128 1261 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 ZNF853P0CG23 659 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 AFMP43652 599 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 UBASH3AP57075 661 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 LONRF3Q496Y0 759 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 LEKR1Q6ZMV7 388 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 KIAA1524Q8TCG1 905 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 PDLIM2Q96JY6 352 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 EPC1Q9H2F5 836 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 TAF6LQ9Y6J9 622 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 ABCC1P33527 1531 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 USP27XA6NNY8 438 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 H0YHG0 523 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 CCDC57Q2TAC2 916 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 KIF4BQ2VIQ3 1234 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 C11orf57Q6ZUT1 292 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 CNNM3Q8NE01 707 aa8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 HELBQ8NG08 1087 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 LSG1Q9H089 658 aaKnown RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
TGFBR3-207ENST00000525962 KAT6BQ8WYB5 2073 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 MINDY4BA8MYZ0 360 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 EVA1CP58658 441 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 KRT32Q14532 448 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ENOX2Q16206 610 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CCDC158Q5M9N0 1113 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 GDAP1L1Q96MZ0 367 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 USP28Q96RU2 1077 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 RAI14Q9P0K7 980 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ABCF2Q9UG63 623 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 HOOK1Q9UJC3 728 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 UHRF1BP1LA0JNW5 1464 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 SMTNL1A8MU46 457 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 SLU7O95391 586 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CUL4AQ13619 759 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 PPFIBP1Q86W92 1011 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CERS3Q8IU89 383 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CCDC12Q8WUD4 166 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ZKSCAN3Q9BRR0 538 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CARD6Q9BX69 1037 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 NLRP1Q9C000 1473 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ZCCHC11Q5TAX3 1644 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ERICH2A1L162 156 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CYP2E1P05181 493 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 SAMD1Q6SPF0 538 aaPredicted RBP8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ANKRD20A12PQ8NF67 263 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 STAMQ92783 540 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 CENPHQ9H3R5 247 aa8.06□□□□□ -1.12
TGFBR3-207ENST00000525962 ASXL2Q76L83 1435 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 hCG_1642624A0A1W2PR95 340 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 RPS6KB1P23443 525 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 C10orf67Q8IYJ2 551 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 NEK11Q8NG66 645 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 PAXBP1Q9Y5B6 917 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 U3KPZ7 1027 aaPredicted RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 ADGBQ8N7X0 1667 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 RHOXF2BP0C7M4 288 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 MATR3P43243 847 aaKnown RBP eCLIP8.05□□□□□ -1.125e-9■■■■□ 21.6
TGFBR3-207ENST00000525962 GYS2P54840 703 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 CCDC144BQ3MJ40 725 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 NBPF6Q5VWK0 638 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 EEF2KMTQ96G04 330 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 NBPF4Q96M43 638 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 RHOXF2Q9BQY4 288 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 AP5Z1O43299 807 aa8.05□□□□□ -1.12
TGFBR3-207ENST00000525962 ERCC3P19447 782 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms