RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
CLP1-202ENST00000525602 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
CLP1-202ENST00000525602 KSR2Q6VAB6 950 aa16.36■□□□□ 0.21
CLP1-202ENST00000525602 RBM17Q96I25 401 aaKnown RBP16.36■□□□□ 0.21
CLP1-202ENST00000525602 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
CLP1-202ENST00000525602 METTL22Q9BUU2 404 aaPredicted RBP16.36■□□□□ 0.21
CLP1-202ENST00000525602 MAP3K2Q9Y2U5 619 aa16.36■□□□□ 0.21
CLP1-202ENST00000525602 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLP1-202ENST00000525602 FLIIQ13045 1269 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 LDHDQ86WU2 507 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
CLP1-202ENST00000525602 FOXN1O15353 648 aa16.34■□□□□ 0.21
CLP1-202ENST00000525602 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
CLP1-202ENST00000525602 IQCA1LA6NCM1 817 aa16.33■□□□□ 0.2
CLP1-202ENST00000525602 SLFN5Q08AF3 891 aa16.33■□□□□ 0.2
CLP1-202ENST00000525602 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.2
CLP1-202ENST00000525602 PPEF1O14829 653 aaPredicted RBP16.32■□□□□ 0.2
CLP1-202ENST00000525602 ITGBL1O95965 494 aaPredicted RBP16.32■□□□□ 0.2
CLP1-202ENST00000525602 IGKV5-2P06315 115 aa16.32■□□□□ 0.2
CLP1-202ENST00000525602 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
CLP1-202ENST00000525602 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
CLP1-202ENST00000525602 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
CLP1-202ENST00000525602 ABCC4O15439 1325 aa16.32■□□□□ 0.2
CLP1-202ENST00000525602 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
CLP1-202ENST00000525602 IARSP41252 1262 aaKnown RBP16.31■□□□□ 0.2
CLP1-202ENST00000525602 VEGFBP49765 207 aa16.31■□□□□ 0.2
CLP1-202ENST00000525602 MAP1SQ66K74 1059 aaPredicted RBP16.31■□□□□ 0.2
CLP1-202ENST00000525602 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
CLP1-202ENST00000525602 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
CLP1-202ENST00000525602 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
CLP1-202ENST00000525602 EPHX2P34913 555 aa16.3■□□□□ 0.2
CLP1-202ENST00000525602 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
CLP1-202ENST00000525602 RTKN2Q8IZC4 609 aa16.3■□□□□ 0.2
CLP1-202ENST00000525602 CLEC11AQ9Y240 323 aa16.3■□□□□ 0.2
CLP1-202ENST00000525602 NEURL1BA8MQ27 555 aa16.29■□□□□ 0.2
CLP1-202ENST00000525602 SF3B3Q15393 1217 aaKnown RBP16.29■□□□□ 0.2
CLP1-202ENST00000525602 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
CLP1-202ENST00000525602 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
CLP1-202ENST00000525602 DNAAF4Q8WXU2 420 aa16.29■□□□□ 0.2
CLP1-202ENST00000525602 TAF1P21675 1872 aa16.29■□□□□ 0.2
CLP1-202ENST00000525602 COL4A1P02462 1669 aa16.28■□□□□ 0.2
CLP1-202ENST00000525602 TMEM88BA6NKF7 163 aa16.28■□□□□ 0.2
CLP1-202ENST00000525602 FZD9O00144 591 aa16.28■□□□□ 0.2
CLP1-202ENST00000525602 FMR1Q06787 632 aaKnown RBP eCLIP16.28■□□□□ 0.2
CLP1-202ENST00000525602 GRAPQ13588 217 aa16.28■□□□□ 0.2
CLP1-202ENST00000525602 CWF19L2Q2TBE0 894 aaKnown RBP16.28■□□□□ 0.2
CLP1-202ENST00000525602 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
CLP1-202ENST00000525602 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
CLP1-202ENST00000525602 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
CLP1-202ENST00000525602 CDHR2Q9BYE9 1310 aa16.28■□□□□ 0.2
CLP1-202ENST00000525602 PSMD1Q99460 953 aa16.27■□□□□ 0.2
CLP1-202ENST00000525602 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
CLP1-202ENST00000525602 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
CLP1-202ENST00000525602 LRRC37AA6NMS7 1700 aa16.27■□□□□ 0.2
CLP1-202ENST00000525602 F6X3S4 739 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 BBOX1O75936 387 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
CLP1-202ENST00000525602 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 PDE8AO60658 829 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 CNTROBQ8N137 903 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 LINS1Q8NG48 757 aa16.26■□□□□ 0.19
CLP1-202ENST00000525602 MYH3P11055 1940 aa16.25■□□□□ 0.19
CLP1-202ENST00000525602 THSD7BQ9C0I4 1608 aa16.25■□□□□ 0.19
CLP1-202ENST00000525602 GCKRQ14397 625 aa16.25■□□□□ 0.19
CLP1-202ENST00000525602 SP8Q8IXZ3 490 aa16.25■□□□□ 0.19
CLP1-202ENST00000525602 GPC2Q8N158 579 aa16.25■□□□□ 0.19
CLP1-202ENST00000525602 MRPL50Q8N5N7 158 aaKnown RBP16.25■□□□□ 0.19
CLP1-202ENST00000525602 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
CLP1-202ENST00000525602 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
CLP1-202ENST00000525602 SCNN1DP51172 638 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 LBX1P52954 281 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 TMC4Q7Z404 712 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 SSH1Q8WYL5 1049 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 AIDAQ96BJ3 306 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 TRPM7Q96QT4 1865 aa16.24■□□□□ 0.19
CLP1-202ENST00000525602 H7C1W4 665 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 EPS15P42566 896 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 CTSWP56202 376 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
CLP1-202ENST00000525602 ABT1Q9ULW3 272 aaKnown RBP16.23■□□□□ 0.19
CLP1-202ENST00000525602 DUOX1Q9NRD9 1551 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 RASSF10A6NK89 507 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 TRAF5O00463 557 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
CLP1-202ENST00000525602 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
CLP1-202ENST00000525602 CASP7P55210 303 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLP1-202ENST00000525602 ALDH1L2Q3SY69 923 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 PNMA8AQ86V59 439 aaPredicted RBP16.22■□□□□ 0.19
CLP1-202ENST00000525602 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
CLP1-202ENST00000525602 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
CLP1-202ENST00000525602 WBP1LQ9NX94 342 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms