RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 XP32Q5T750 250 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 SULT6B1Q6IMI4 303 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 FAM160A2Q8N612 972 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 SLC4A9Q96Q91 983 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 SBF2Q86WG5 1849 aa8.08□□□□□ -1.12
CCDC90B-204ENST00000525504 LTN1O94822 1766 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 UTRNP46939 3433 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 YY1P25490 414 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 SSFA2P28290 1259 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 RC3H1Q5TC82 1133 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 ZNF530Q6P9A1 599 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 CD2APQ9Y5K6 639 aa8.07□□□□□ -1.12
CCDC90B-204ENST00000525504 WNK3Q9BYP7 1800 aa8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 FMNL1O95466 1100 aaPredicted RBP8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 ATP6V1AP38606 617 aa8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 WDR70Q9NW82 654 aa8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 CASZ1Q86V15 1759 aa8.06□□□□□ -1.12
CCDC90B-204ENST00000525504 MYOM1P52179 1685 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 DIAPH1O60610 1272 aaKnown RBP8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 IGHA1P01876 353 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 CABP4P57796 275 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 MORN1Q5T089 497 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 NFATC2IPQ8NCF5 419 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 AK7Q96M32 723 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
CCDC90B-204ENST00000525504 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 MSS51Q4VC12 460 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 C1orf141Q5JVX7 400 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 CC2D1BQ5T0F9 858 aaKnown RBP8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 TRAPPC3LQ5T215 181 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 SMIM5Q71RC9 77 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 NLGN2Q8NFZ4 835 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 LGR6Q9HBX8 967 aa8.04□□□□□ -1.12
CCDC90B-204ENST00000525504 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 KDM6AO15550 1401 aaPredicted RBP8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 GNPATO15228 680 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 MTHFSDQ2M296 383 aaKnown RBP8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 TRIM46Q7Z4K8 759 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 PRDM9Q9NQV7 894 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 RTCBQ9Y3I0 505 aaKnown RBP8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 BTAF1O14981 1849 aa8.03□□□□□ -1.12
CCDC90B-204ENST00000525504 RNMTO43148 476 aaKnown RBP8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 GRIN3BO60391 1043 aa8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 HMOX1P09601 288 aa8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 PTGDRQ13258 359 aa8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 GPR162Q16538 588 aa8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 ARHGEF1Q92888 912 aaKnown RBP8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 SLC52A2Q9HAB3 445 aa8.02□□□□□ -1.13
CCDC90B-204ENST00000525504 ANKRD26Q9UPS8 1709 aa8.01□□□□□ -1.13
CCDC90B-204ENST00000525504 PTCD1O75127 700 aaKnown RBP8.01□□□□□ -1.13
CCDC90B-204ENST00000525504 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
CCDC90B-204ENST00000525504 INTS5Q6P9B9 1019 aaKnown RBP8.01□□□□□ -1.13
CCDC90B-204ENST00000525504 SHANK3Q9BYB0 1731 aa8□□□□□ -1.13
CCDC90B-204ENST00000525504 MMP10P09238 476 aa8□□□□□ -1.13
CCDC90B-204ENST00000525504 GYS1P13807 737 aa8□□□□□ -1.13
CCDC90B-204ENST00000525504 VSIG10Q8N0Z9 540 aa8□□□□□ -1.13
CCDC90B-204ENST00000525504 IL17REQ8NFR9 667 aa8□□□□□ -1.13
CCDC90B-204ENST00000525504 GOLGB1Q14789 3259 aaKnown RBP7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 CYP19A1P11511 503 aaPredicted RBP7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 BMP1P13497 986 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 PPP2R1AP30153 589 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 RFC4P35249 363 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 CRKLP46109 303 aaKnown RBP7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 TGFB2P61812 414 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 BRICD5Q6PL45 260 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 PKD1L3Q7Z443 1732 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 DNAJC10Q8IXB1 793 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 GAS2L2Q8NHY3 880 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 PHACTR3Q96KR7 559 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 KIF20BQ96Q89 1820 aa7.99□□□□□ -1.13
CCDC90B-204ENST00000525504 LY75O60449 1722 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 RGPD2P0DJD1 1756 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 CAPN5O15484 640 aaPredicted RBP7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 FCHSD2O94868 740 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 TM4SF1P30408 202 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 WNT7BP56706 349 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 SLC39A6Q13433 755 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 RSPH6AQ9H0K4 717 aa7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 DNMT3AQ9Y6K1 912 aaPredicted RBP7.98□□□□□ -1.13
CCDC90B-204ENST00000525504 GNAT3A8MTJ3 354 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 FOXK2Q01167 660 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 CFAP53Q96M91 514 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 NUDCQ9Y266 331 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 SLC27A5Q9Y2P5 690 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 KAT6BQ8WYB5 2073 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 DOT1LQ8TEK3 1739 aa7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 SOS1Q07889 1333 aaPredicted RBP7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 USP42Q9H9J4 1324 aaKnown RBP7.97□□□□□ -1.13
CCDC90B-204ENST00000525504 CEMIPQ8WUJ3 1361 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms