RNA–Protein interactions for RNA: ENST00000525413.5

CHRDL2-204, Transcript of chordin like 2, humanhuman

TSL 5

Gene CHRDL2, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-204ENST00000525413 HOXA10P31260 410 aaPredicted RBP17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 AAMPQ13685 434 aa17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 RABL6Q3YEC7 729 aaPredicted RBP17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 STYK1Q6J9G0 422 aa17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 RBM17Q96I25 401 aaKnown RBP17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 BICC1Q9H694 974 aaKnown RBP17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 LRRFIP2Q9Y608 721 aaKnown RBP17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 DLEC1Q9Y238 1755 aa17.28■□□□□ 0.36
CHRDL2-204ENST00000525413 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 ALDH1B1P30837 517 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 KAZALD1Q96I82 304 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 CRAMP1Q96RY5 1269 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 SYT17Q9BSW7 474 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 ZBTB40Q9NUA8 1239 aa17.27■□□□□ 0.36
CHRDL2-204ENST00000525413 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.35
CHRDL2-204ENST00000525413 DPEP1P16444 411 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 CHRNA5P30532 468 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 LMBR1LQ6UX01 489 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
CHRDL2-204ENST00000525413 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
CHRDL2-204ENST00000525413 ANKRD44Q8N8A2 993 aa17.25■□□□□ 0.35
CHRDL2-204ENST00000525413 ZNF622Q969S3 477 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHRDL2-204ENST00000525413 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
CHRDL2-204ENST00000525413 PIM2Q9P1W9 311 aa17.25■□□□□ 0.35
CHRDL2-204ENST00000525413 KCNA3P22001 575 aa17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 IFIT5Q13325 482 aaKnown RBP17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 MTX1Q13505 466 aa17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 CCDC57Q2TAC2 916 aa17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 GREM2Q9H772 168 aa17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 CHMP3Q9Y3E7 222 aa17.24■□□□□ 0.35
CHRDL2-204ENST00000525413 GOLGB1Q14789 3259 aaKnown RBP17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 ITGA6P23229 1130 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 GRAPQ13588 217 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 TMC4Q7Z404 712 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 GRAPLQ8TC17 118 aaPredicted RBP17.23■□□□□ 0.35
CHRDL2-204ENST00000525413 BBOX1O75936 387 aa17.22■□□□□ 0.35
CHRDL2-204ENST00000525413 NEFLP07196 543 aa17.22■□□□□ 0.35
CHRDL2-204ENST00000525413 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
CHRDL2-204ENST00000525413 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
CHRDL2-204ENST00000525413 CCDC85AQ96PX6 553 aaPredicted RBP17.22■□□□□ 0.35
CHRDL2-204ENST00000525413 UTRNP46939 3433 aa17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 BRCA1P38398 1863 aaKnown RBP17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 RPS8P62241 208 aaKnown RBP17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 DALRD3Q5D0E6 543 aaKnown RBP17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 C1orf115Q9H7X2 142 aa17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 SEC31BQ9NQW1 1179 aa17.21■□□□□ 0.35
CHRDL2-204ENST00000525413 SRGAP3O43295 1099 aa17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 TAF7LQ5H9L4 462 aa17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
CHRDL2-204ENST00000525413 PPEF1O14829 653 aaPredicted RBP17.19■□□□□ 0.34
CHRDL2-204ENST00000525413 HMMRO75330 724 aa17.19■□□□□ 0.34
CHRDL2-204ENST00000525413 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
CHRDL2-204ENST00000525413 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
CHRDL2-204ENST00000525413 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
CHRDL2-204ENST00000525413 SOGA3Q5TF21 947 aa17.18■□□□□ 0.34
CHRDL2-204ENST00000525413 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
CHRDL2-204ENST00000525413 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
CHRDL2-204ENST00000525413 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
CHRDL2-204ENST00000525413 PNMA6EA0A0J9YXQ4 647 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 CACNA1SQ13698 1873 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 POLA2Q14181 598 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 GRIPAP1Q4V328 841 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 SP8Q8IXZ3 490 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 SSH3Q8TE77 659 aa17.17■□□□□ 0.34
CHRDL2-204ENST00000525413 RFX5P48382 616 aaPredicted RBP17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 PTPN12Q05209 780 aaKnown RBP17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 LDHAL6AQ6ZMR3 332 aa17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 COPRSQ9NQ92 184 aa17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 ATP6V0A2Q9Y487 856 aa17.16■□□□□ 0.34
CHRDL2-204ENST00000525413 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
CHRDL2-204ENST00000525413 ARFGEF1Q9Y6D6 1849 aa17.15■□□□□ 0.34
CHRDL2-204ENST00000525413 CNNM1Q9NRU3 951 aa17.15■□□□□ 0.34
CHRDL2-204ENST00000525413 TAF1P21675 1872 aa17.15■□□□□ 0.34
CHRDL2-204ENST00000525413 LRRC37AA6NMS7 1700 aa17.14■□□□□ 0.33
CHRDL2-204ENST00000525413 CIAO1O76071 339 aa17.14■□□□□ 0.33
CHRDL2-204ENST00000525413 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
CHRDL2-204ENST00000525413 ZNF594Q96JF6 807 aaPredicted RBP17.14■□□□□ 0.33
CHRDL2-204ENST00000525413 SPEF2Q9C093 1822 aa17.14■□□□□ 0.33
CHRDL2-204ENST00000525413 EYA2O00167 538 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 C21orf2O43822 256 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 COL4A1P02462 1669 aa17.13■□□□□ 0.33
CHRDL2-204ENST00000525413 HSP90AB4PQ58FF6 505 aa17.12■□□□□ 0.33
CHRDL2-204ENST00000525413 ERICH6BQ5W0A0 696 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms