RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
CD44-213ENST00000525209 FOXC1Q12948 553 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 RAB33AQ14088 237 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 NAA30Q147X3 362 aaPredicted RBP5.72□□□□□ -1.49
CD44-213ENST00000525209 PPP2R5AQ15172 486 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 KRT26Q7Z3Y9 468 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 CXorf38Q8TB03 319 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 TRPM4Q8TD43 1214 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 SEC16BQ96JE7 1060 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 GGT7Q9UJ14 662 aa5.72□□□□□ -1.49
CD44-213ENST00000525209 CCDC180Q9P1Z9 1646 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 ESYT3A0FGR9 886 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 LGR5O75473 907 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 BPNT1O95861 308 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 MZF1P28698 734 aaPredicted RBP5.71□□□□□ -1.5
CD44-213ENST00000525209 CDKN1CP49918 316 aaPredicted RBP5.71□□□□□ -1.5
CD44-213ENST00000525209 EPHB1P54762 984 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 GTF2IP78347 998 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 POU5F1Q01860 360 aaKnown RBP5.71□□□□□ -1.5
CD44-213ENST00000525209 NFX1Q12986 1120 aaKnown RBP5.71□□□□□ -1.5
CD44-213ENST00000525209 RAPGEF1Q13905 1077 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 ICE2Q659A1 982 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 ANKS3Q6ZW76 656 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 LILRB2Q8N423 598 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 RUNDC1Q96C34 613 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 PURBQ96QR8 312 aaKnown RBP5.71□□□□□ -1.5
CD44-213ENST00000525209 HINFPQ9BQA5 517 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 TRIM55Q9BYV6 548 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 CCDC87Q9NVE4 849 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 FKBPLQ9UIM3 349 aa5.71□□□□□ -1.5
CD44-213ENST00000525209 PNMA6FA0A0J9YX94 578 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 FZD6O60353 706 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 GDF9O60383 454 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 PDE6BP35913 854 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 TSGA10IPQ3SY00 556 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 PPP4R4Q6NUP7 873 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.7□□□□□ -1.5
CD44-213ENST00000525209 C16orf86Q6ZW13 317 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 JAMLQ86YT9 394 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 PDILTQ8N807 584 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
CD44-213ENST00000525209 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.7□□□□□ -1.5
CD44-213ENST00000525209 FEZ1Q99689 392 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.7□□□□□ -1.5
CD44-213ENST00000525209 ENAMQ9NRM1 1142 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 TMEM260Q9NX78 707 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 TPX2Q9ULW0 747 aaKnown RBP5.7□□□□□ -1.5
CD44-213ENST00000525209 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
CD44-213ENST00000525209 FAM187AA6NFU0 413 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 ALDH1L1O75891 902 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 CDC27P30260 824 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 ETFBP38117 255 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 RASSF7Q02833 373 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 TMEM95Q3KNT9 176 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 PKDCCQ504Y2 493 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 CCDC174Q6PII3 467 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 PAF1Q8N7H5 531 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 FBF1Q8TES7 1133 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 SYMPKQ92797 1274 aaKnown RBP5.69□□□□□ -1.5
CD44-213ENST00000525209 CFHR5Q9BXR6 569 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 ZHX3Q9H4I2 956 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 PKD2L1Q9P0L9 805 aa5.69□□□□□ -1.5
CD44-213ENST00000525209 SALL2Q9Y467 1007 aaPredicted RBP5.69□□□□□ -1.5
CD44-213ENST00000525209 TBX3O15119 743 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 KCNQ2O43526 872 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 TIMM44O43615 452 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 ZRANB2O95218 330 aaKnown RBP eCLIP5.68□□□□□ -1.5
CD44-213ENST00000525209 EIF1AXP47813 144 aaKnown RBP5.68□□□□□ -1.5
CD44-213ENST00000525209 PRR20EP86478 221 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 PRR20CP86479 221 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 PRR20DP86480 221 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 PRR20BP86481 221 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 PRR20AP86496 221 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 TTF1Q15361 905 aaPredicted RBP5.68□□□□□ -1.5
CD44-213ENST00000525209 MSS51Q4VC12 460 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 C10orf62Q5T681 223 aaPredicted RBP5.68□□□□□ -1.5
CD44-213ENST00000525209 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 ALKBH2Q6NS38 261 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 NIF3L1Q9GZT8 377 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 KCNG1Q9UIX4 513 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 LZTS1Q9Y250 596 aa5.68□□□□□ -1.5
CD44-213ENST00000525209 USP31Q70CQ4 1352 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 CCDC163A0A0D9SF12 145 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 A6NJY4 79 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 NPHP1O15259 732 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 LDHCP07864 332 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 FAM163BP0C2L3 166 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 POU3F3P20264 500 aaPredicted RBP5.67□□□□□ -1.5
CD44-213ENST00000525209 CTHP32929 405 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 LRRC41Q15345 812 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 Q3C1V9 767 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 INO80DQ53TQ3 878 aaPredicted RBP5.67□□□□□ -1.5
CD44-213ENST00000525209 LYPD8Q6UX82 237 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 NEUROD6Q96NK8 337 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 DNAJC7Q99615 494 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 USB1Q9BQ65 265 aaKnown RBP5.67□□□□□ -1.5
CD44-213ENST00000525209 CCDC113Q9H0I3 377 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 KLF15Q9UIH9 416 aa5.67□□□□□ -1.5
CD44-213ENST00000525209 ALG1L2C9J202 215 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms