RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 CTSWP56202 376 aa17.6■□□□□ 0.41
UBXN1-205ENST00000525004 BICC1Q9H694 974 aaKnown RBP17.6■□□□□ 0.41
UBXN1-205ENST00000525004 LRRFIP2Q9Y608 721 aaKnown RBP17.6■□□□□ 0.41
UBXN1-205ENST00000525004 BRCA1P38398 1863 aaKnown RBP17.6■□□□□ 0.41
UBXN1-205ENST00000525004 TAF1P21675 1872 aa17.59■□□□□ 0.41
UBXN1-205ENST00000525004 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
UBXN1-205ENST00000525004 SRGNP10124 158 aa17.59■□□□□ 0.41
UBXN1-205ENST00000525004 KCNA3P22001 575 aa17.58■□□□□ 0.4
UBXN1-205ENST00000525004 LMBR1LQ6UX01 489 aa17.58■□□□□ 0.4
UBXN1-205ENST00000525004 EXOC6Q8TAG9 804 aa17.58■□□□□ 0.4
UBXN1-205ENST00000525004 CCDC152Q4G0S7 254 aa17.57■□□□□ 0.4
UBXN1-205ENST00000525004 H0YIN7 160 aa17.56■□□□□ 0.4
UBXN1-205ENST00000525004 NPR1P16066 1061 aa17.56■□□□□ 0.4
UBXN1-205ENST00000525004 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
UBXN1-205ENST00000525004 RPAP2Q8IXW5 612 aaPredicted RBP17.56■□□□□ 0.4
UBXN1-205ENST00000525004 MASTLQ96GX5 879 aa17.56■□□□□ 0.4
UBXN1-205ENST00000525004 CRAMP1Q96RY5 1269 aa17.56■□□□□ 0.4
UBXN1-205ENST00000525004 STYK1Q6J9G0 422 aa17.55■□□□□ 0.4
UBXN1-205ENST00000525004 CEP85Q6P2H3 762 aa17.55■□□□□ 0.4
UBXN1-205ENST00000525004 C2CD5Q86YS7 1000 aa17.55■□□□□ 0.4
UBXN1-205ENST00000525004 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
UBXN1-205ENST00000525004 GREM2Q9H772 168 aa17.55■□□□□ 0.4
UBXN1-205ENST00000525004 SRCAPQ6ZRS2 3230 aa17.55■□□□□ 0.4
UBXN1-205ENST00000525004 DPEP1P16444 411 aa17.54■□□□□ 0.4
UBXN1-205ENST00000525004 RFX5P48382 616 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-205ENST00000525004 IRX6P78412 446 aaPredicted RBP17.54■□□□□ 0.4
UBXN1-205ENST00000525004 POLA2Q14181 598 aa17.54■□□□□ 0.4
UBXN1-205ENST00000525004 SSH3Q8TE77 659 aa17.54■□□□□ 0.4
UBXN1-205ENST00000525004 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
UBXN1-205ENST00000525004 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
UBXN1-205ENST00000525004 ITGA6P23229 1130 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 CHRNA5P30532 468 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 ALDH1B1P30837 517 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 FAM161AQ3B820 660 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 RPGRQ92834 1020 aaKnown RBP17.53■□□□□ 0.4
UBXN1-205ENST00000525004 RBM17Q96I25 401 aaKnown RBP17.53■□□□□ 0.4
UBXN1-205ENST00000525004 PCDHB15Q9Y5E8 787 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
UBXN1-205ENST00000525004 COL4A1P02462 1669 aa17.52■□□□□ 0.4
UBXN1-205ENST00000525004 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
UBXN1-205ENST00000525004 PNMA6EA0A0J9YXQ4 647 aa17.52■□□□□ 0.4
UBXN1-205ENST00000525004 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
UBXN1-205ENST00000525004 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
UBXN1-205ENST00000525004 CNKSR1Q969H4 720 aa17.52■□□□□ 0.4
UBXN1-205ENST00000525004 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
UBXN1-205ENST00000525004 PPP1R1BQ9UD71 204 aaPredicted RBP17.52■□□□□ 0.4
UBXN1-205ENST00000525004 CACNA1SQ13698 1873 aa17.52■□□□□ 0.39
UBXN1-205ENST00000525004 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 BBOX1O75936 387 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 RPS8P62241 208 aaKnown RBP17.51■□□□□ 0.39
UBXN1-205ENST00000525004 GRAPQ13588 217 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 CCDC57Q2TAC2 916 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 ERICH6BQ5W0A0 696 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
UBXN1-205ENST00000525004 COPRSQ9NQ92 184 aa17.51■□□□□ 0.39
UBXN1-205ENST00000525004 ARFGEF1Q9Y6D6 1849 aa17.5■□□□□ 0.39
UBXN1-205ENST00000525004 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
UBXN1-205ENST00000525004 PTPN12Q05209 780 aaKnown RBP17.5■□□□□ 0.39
UBXN1-205ENST00000525004 NLGN2Q8NFZ4 835 aa17.5■□□□□ 0.39
UBXN1-205ENST00000525004 CELF1Q92879 486 aaKnown RBP17.5■□□□□ 0.39
UBXN1-205ENST00000525004 CCDC85AQ96PX6 553 aaPredicted RBP17.5■□□□□ 0.39
UBXN1-205ENST00000525004 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
UBXN1-205ENST00000525004 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
UBXN1-205ENST00000525004 FBXO3Q9UK99 471 aa17.5■□□□□ 0.39
UBXN1-205ENST00000525004 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
UBXN1-205ENST00000525004 TTLL6Q8N841 843 aa17.49■□□□□ 0.39
UBXN1-205ENST00000525004 C7orf43Q8WVR3 580 aa17.49■□□□□ 0.39
UBXN1-205ENST00000525004 BSDC1Q9NW68 430 aaPredicted RBP17.49■□□□□ 0.39
UBXN1-205ENST00000525004 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
UBXN1-205ENST00000525004 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
UBXN1-205ENST00000525004 LRRC37AA6NMS7 1700 aa17.48■□□□□ 0.39
UBXN1-205ENST00000525004 NEFLP07196 543 aa17.48■□□□□ 0.39
UBXN1-205ENST00000525004 ZNF622Q969S3 477 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBXN1-205ENST00000525004 CHMP3Q9Y3E7 222 aa17.48■□□□□ 0.39
UBXN1-205ENST00000525004 ANKRD18AQ8IVF6 992 aa17.47■□□□□ 0.39
UBXN1-205ENST00000525004 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
UBXN1-205ENST00000525004 HMMRO75330 724 aa17.46■□□□□ 0.39
UBXN1-205ENST00000525004 CIAO1O76071 339 aa17.46■□□□□ 0.39
UBXN1-205ENST00000525004 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-205ENST00000525004 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
UBXN1-205ENST00000525004 SP8Q8IXZ3 490 aa17.46■□□□□ 0.39
UBXN1-205ENST00000525004 KLHL34Q8N239 644 aa17.46■□□□□ 0.39
UBXN1-205ENST00000525004 ZNF594Q96JF6 807 aaPredicted RBP17.46■□□□□ 0.39
UBXN1-205ENST00000525004 ATP6V0A2Q9Y487 856 aa17.46■□□□□ 0.39
UBXN1-205ENST00000525004 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
UBXN1-205ENST00000525004 IGHMBP2P38935 993 aaKnown RBP17.45■□□□□ 0.38
UBXN1-205ENST00000525004 ATG9AQ7Z3C6 839 aa17.45■□□□□ 0.38
UBXN1-205ENST00000525004 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
UBXN1-205ENST00000525004 SNED1Q8TER0 1413 aa17.45■□□□□ 0.38
UBXN1-205ENST00000525004 EYA2O00167 538 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 DALRD3Q5D0E6 543 aaKnown RBP17.44■□□□□ 0.38
UBXN1-205ENST00000525004 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 LDHAL6AQ6ZMR3 332 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 PUS3Q9BZE2 481 aaKnown RBP17.44■□□□□ 0.38
UBXN1-205ENST00000525004 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 PA2G4Q9UQ80 394 aaKnown RBP17.44■□□□□ 0.38
UBXN1-205ENST00000525004 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
UBXN1-205ENST00000525004 FER1L6Q2WGJ9 1857 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms