RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 CSF1RP07333 972 aa18.48■□□□□ 0.55
BEST1-204ENST00000524926 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
BEST1-204ENST00000524926 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
BEST1-204ENST00000524926 IRS4O14654 1257 aaPredicted RBP18.47■□□□□ 0.55
BEST1-204ENST00000524926 GPR108Q9NPR9 543 aa18.47■□□□□ 0.55
BEST1-204ENST00000524926 CEP126Q9P2H0 1117 aa18.47■□□□□ 0.55
BEST1-204ENST00000524926 NDUFB9Q9Y6M9 179 aa18.47■□□□□ 0.55
BEST1-204ENST00000524926 NUP98P52948 1817 aa18.47■□□□□ 0.55
BEST1-204ENST00000524926 NMIQ13287 307 aaPredicted RBP18.47■□□□□ 0.55
BEST1-204ENST00000524926 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
BEST1-204ENST00000524926 CERKQ8TCT0 537 aa18.47■□□□□ 0.55
BEST1-204ENST00000524926 ZNF34Q8IZ26 560 aa18.46■□□□□ 0.55
BEST1-204ENST00000524926 UBN2Q6ZU65 1347 aa18.46■□□□□ 0.55
BEST1-204ENST00000524926 TTLL11Q8NHH1 800 aa18.45■□□□□ 0.54
BEST1-204ENST00000524926 CIZ1Q9ULV3 898 aaPredicted RBP18.45■□□□□ 0.54
BEST1-204ENST00000524926 A0A1B0GUL7 405 aa18.45■□□□□ 0.54
BEST1-204ENST00000524926 PTH1RQ03431 593 aa18.45■□□□□ 0.54
BEST1-204ENST00000524926 UPF3BQ9BZI7 483 aaKnown RBP18.45■□□□□ 0.54
BEST1-204ENST00000524926 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 CTSWP56202 376 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 HAUS7Q99871 368 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 GREM2Q9H772 168 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 ITGA6P23229 1130 aa18.44■□□□□ 0.54
BEST1-204ENST00000524926 PDE8AO60658 829 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 MCM2P49736 904 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 SNX14Q9Y5W7 946 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 A0A0D9SFI3 127 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 ANKRD18BA2A2Z9 1011 aa18.43■□□□□ 0.54
BEST1-204ENST00000524926 KCNQ4P56696 695 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 LDHAL6AQ6ZMR3 332 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
BEST1-204ENST00000524926 RASEFQ8IZ41 740 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 AKAP2Q9Y2D5 859 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 MYH14Q7Z406 1995 aaKnown RBP18.42■□□□□ 0.54
BEST1-204ENST00000524926 CAMTA2O94983 1202 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 KCNJ4P48050 445 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 FAM182BQ5T319 152 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 AEBP2Q6ZN18 517 aaPredicted RBP18.42■□□□□ 0.54
BEST1-204ENST00000524926 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
BEST1-204ENST00000524926 PTF1AQ7RTS3 328 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 CCDC171Q6TFL3 1326 aa18.42■□□□□ 0.54
BEST1-204ENST00000524926 ZNF609O15014 1411 aa18.41■□□□□ 0.54
BEST1-204ENST00000524926 DEKP35659 375 aaKnown RBP18.41■□□□□ 0.54
BEST1-204ENST00000524926 PRPF40BQ6NWY9 871 aaKnown RBP18.41■□□□□ 0.54
BEST1-204ENST00000524926 HSPA1LP34931 641 aa18.41■□□□□ 0.54
BEST1-204ENST00000524926 GORABQ5T7V8 394 aa18.41■□□□□ 0.54
BEST1-204ENST00000524926 TMX3Q96JJ7 454 aa18.41■□□□□ 0.54
BEST1-204ENST00000524926 IFIT1P09914 478 aaKnown RBP18.4■□□□□ 0.54
BEST1-204ENST00000524926 UTP14AQ9BVJ6 771 aaKnown RBP18.4■□□□□ 0.54
BEST1-204ENST00000524926 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 SH3TC1Q8TE82 1336 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 GOLIM4O00461 696 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 MCM4P33991 863 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 RAB3GAP1Q15042 981 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 METTL24Q5JXM2 366 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 LINC00116Q8NCU8 138 aa18.4■□□□□ 0.54
BEST1-204ENST00000524926 TNPO1Q92973 898 aaKnown RBP18.4■□□□□ 0.54
BEST1-204ENST00000524926 NIP7Q9Y221 180 aaKnown RBP eCLIP18.4■□□□□ 0.54
BEST1-204ENST00000524926 HCLS1P14317 486 aaPredicted RBP18.39■□□□□ 0.53
BEST1-204ENST00000524926 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 MAP4K1Q92918 833 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
BEST1-204ENST00000524926 PAG1Q9NWQ8 432 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 RBM8AQ9Y5S9 174 aaKnown RBP18.39■□□□□ 0.53
BEST1-204ENST00000524926 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 ZGPATQ8N5A5 531 aaKnown RBP18.39■□□□□ 0.53
BEST1-204ENST00000524926 XAGE2Q96GT9 111 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 RIPOR2Q9Y4F9 1068 aa18.39■□□□□ 0.53
BEST1-204ENST00000524926 NECTIN1Q15223 517 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
BEST1-204ENST00000524926 KBTBD3Q8NAB2 608 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 CWC22Q9HCG8 908 aaKnown RBP18.38■□□□□ 0.53
BEST1-204ENST00000524926 MYH3P11055 1940 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 CHGBP05060 677 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 ZKSCAN1P17029 563 aaPredicted RBP18.38■□□□□ 0.53
BEST1-204ENST00000524926 ADORA1P30542 326 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 ZNF652Q9Y2D9 606 aa18.38■□□□□ 0.53
BEST1-204ENST00000524926 CASTP20810 708 aaKnown RBP18.37■□□□□ 0.53
BEST1-204ENST00000524926 TTC39AQ5SRH9 613 aa18.37■□□□□ 0.53
BEST1-204ENST00000524926 AK7Q96M32 723 aa18.37■□□□□ 0.53
BEST1-204ENST00000524926 AFF2P51816 1311 aa18.37■□□□□ 0.53
BEST1-204ENST00000524926 MED23Q9ULK4 1368 aa18.37■□□□□ 0.53
BEST1-204ENST00000524926 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
BEST1-204ENST00000524926 IL27Q8NEV9 243 aa18.37■□□□□ 0.53
BEST1-204ENST00000524926 RREB1Q92766 1687 aa18.36■□□□□ 0.53
BEST1-204ENST00000524926 CICQ96RK0 1608 aaPredicted RBP18.36■□□□□ 0.53
BEST1-204ENST00000524926 CREB3L3Q68CJ9 461 aa18.36■□□□□ 0.53
BEST1-204ENST00000524926 JAKMIP1Q96N16 626 aaKnown RBP18.36■□□□□ 0.53
BEST1-204ENST00000524926 RFX7Q2KHR2 1363 aa18.36■□□□□ 0.53
BEST1-204ENST00000524926 ATP2B3Q16720 1220 aa18.35■□□□□ 0.53
BEST1-204ENST00000524926 MCMDC2Q4G0Z9 681 aa18.35■□□□□ 0.53
BEST1-204ENST00000524926 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
BEST1-204ENST00000524926 TAF5LO75529 589 aa18.35■□□□□ 0.53
BEST1-204ENST00000524926 SSFA2P28290 1259 aa18.35■□□□□ 0.53
BEST1-204ENST00000524926 ADCK5Q3MIX3 580 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms