RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 IGHDP01880 384 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 CSF1RP07333 972 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 POLA2Q14181 598 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 CCDC152Q4G0S7 254 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 TTLL11Q8NHH1 800 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
TSPAN4-213ENST00000524895 FAM161AQ3B820 660 aa19.7■□□□□ 0.74
TSPAN4-213ENST00000524895 POLD1P28340 1107 aa19.69■□□□□ 0.74
TSPAN4-213ENST00000524895 CCDC57Q2TAC2 916 aa19.69■□□□□ 0.74
TSPAN4-213ENST00000524895 C3orf67Q6ZVT6 689 aa19.69■□□□□ 0.74
TSPAN4-213ENST00000524895 CENPQQ7L2Z9 268 aaPredicted RBP19.69■□□□□ 0.74
TSPAN4-213ENST00000524895 GREM2Q9H772 168 aa19.69■□□□□ 0.74
TSPAN4-213ENST00000524895 IFIT5Q13325 482 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-213ENST00000524895 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
TSPAN4-213ENST00000524895 ATF5Q9Y2D1 282 aaPredicted RBP19.68■□□□□ 0.74
TSPAN4-213ENST00000524895 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
TSPAN4-213ENST00000524895 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
TSPAN4-213ENST00000524895 ANKRD18BA2A2Z9 1011 aa19.67■□□□□ 0.74
TSPAN4-213ENST00000524895 ITGA6P23229 1130 aa19.67■□□□□ 0.74
TSPAN4-213ENST00000524895 TAF7LQ5H9L4 462 aa19.67■□□□□ 0.74
TSPAN4-213ENST00000524895 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
TSPAN4-213ENST00000524895 RFX5P48382 616 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-213ENST00000524895 GCC1Q96CN9 775 aa19.66■□□□□ 0.74
TSPAN4-213ENST00000524895 DCTPP1Q9H773 170 aa19.66■□□□□ 0.74
TSPAN4-213ENST00000524895 ANKRD31Q8N7Z5 1873 aa19.66■□□□□ 0.74
TSPAN4-213ENST00000524895 SOCS7O14512 581 aa19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 SURF6O75683 361 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 KLHDC4Q8TBB5 520 aa19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 RPGRQ92834 1020 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 COPRSQ9NQ92 184 aa19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 PA2G4Q9UQ80 394 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 EXOC6BQ9Y2D4 811 aa19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 C10orf71Q711Q0 1435 aa19.65■□□□□ 0.74
TSPAN4-213ENST00000524895 PDE6BP35913 854 aa19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 PTPN12Q05209 780 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 OS9Q13438 667 aaPredicted RBP19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 HSP90AB4PQ58FF6 505 aa19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 SMC5Q8IY18 1101 aa19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 SIL1Q9H173 461 aa19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 LRP5O75197 1615 aa19.64■□□□□ 0.73
TSPAN4-213ENST00000524895 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 DDX46Q7L014 1031 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 ZNF594Q96JF6 807 aaPredicted RBP19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 CDC5LQ99459 802 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 SEC31BQ9NQW1 1179 aa19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 NOP58Q9Y2X3 529 aaKnown RBP19.63■□□□□ 0.73
TSPAN4-213ENST00000524895 APBB1O00213 710 aa19.62■□□□□ 0.73
TSPAN4-213ENST00000524895 G3BP1Q13283 466 aaKnown RBP eCLIP19.62■□□□□ 0.73
TSPAN4-213ENST00000524895 COL11A2P13942 1736 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-213ENST00000524895 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-213ENST00000524895 IGHMBP2P38935 993 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-213ENST00000524895 RBM17Q96I25 401 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-213ENST00000524895 ZBTB47Q9UFB7 747 aaPredicted RBP19.61■□□□□ 0.73
TSPAN4-213ENST00000524895 RAB11FIP3O75154 756 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 ERC1Q8IUD2 1116 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 ANKRD18AQ8IVF6 992 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 MPHOSPH8Q99549 860 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 SPON1Q9HCB6 807 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 FBXO3Q9UK99 471 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
TSPAN4-213ENST00000524895 EYA2O00167 538 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 CIAO1O76071 339 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 PTGER2P43116 358 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 LDHAL6AQ6ZMR3 332 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 C2CD5Q86YS7 1000 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 SGIP1Q9BQI5 828 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 CNNM1Q9NRU3 951 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 COL4A1P02462 1669 aa19.59■□□□□ 0.73
TSPAN4-213ENST00000524895 H0YIN7 160 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 NPR1P16066 1061 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 HOXA10P31260 410 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 IL15P40933 162 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 GRAPQ13588 217 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 ANKRD45Q5TZF3 282 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 GRAPLQ8TC17 118 aaPredicted RBP19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 CELF1Q92879 486 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 KIF1BPQ96EK5 621 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
TSPAN4-213ENST00000524895 SRGNP10124 158 aa19.57■□□□□ 0.72
TSPAN4-213ENST00000524895 NUCB1Q02818 461 aa19.57■□□□□ 0.72
TSPAN4-213ENST00000524895 LRRC24Q50LG9 513 aa19.57■□□□□ 0.72
TSPAN4-213ENST00000524895 PUS3Q9BZE2 481 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-213ENST00000524895 RPS8P62241 208 aaKnown RBP19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 ATG9AQ7Z3C6 839 aa19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 RHPN1Q8TCX5 695 aa19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 MASTLQ96GX5 879 aa19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 CRAMP1Q96RY5 1269 aa19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 TAF1P21675 1872 aa19.56■□□□□ 0.72
TSPAN4-213ENST00000524895 CHRNA5P30532 468 aa19.55■□□□□ 0.72
TSPAN4-213ENST00000524895 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
TSPAN4-213ENST00000524895 KLHL34Q8N239 644 aa19.55■□□□□ 0.72
TSPAN4-213ENST00000524895 BCL11AQ9H165 835 aa19.55■□□□□ 0.72
TSPAN4-213ENST00000524895 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-213ENST00000524895 MROH5Q6ZUA9 1318 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 SMARCA5O60264 1052 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 SASH1O94885 1247 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
TSPAN4-213ENST00000524895 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms