RNA–Protein interactions for RNA: ENST00000524794.5

NFRKB-203, Transcript of nuclear factor related to kappaB binding protein, humanhuman

TSL 1 (best) BASIC

Gene NFRKB, Length 4,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKB-203ENST00000524794 PPRC1Q5VV67 1664 aaKnown RBP9.53□□□□□ -0.88
NFRKB-203ENST00000524794 SPHKAPQ2M3C7 1700 aa9.53□□□□□ -0.88
NFRKB-203ENST00000524794 MAP2K2P36507 400 aa9.52□□□□□ -0.88
NFRKB-203ENST00000524794 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.88
NFRKB-203ENST00000524794 CAGE1Q8TC20 777 aa9.52□□□□□ -0.88
NFRKB-203ENST00000524794 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.88
NFRKB-203ENST00000524794 AXIN2Q9Y2T1 843 aa9.52□□□□□ -0.88
NFRKB-203ENST00000524794 ERBB4Q15303 1308 aa9.52□□□□□ -0.88
NFRKB-203ENST00000524794 GBP6Q6ZN66 633 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 NBPF5PQ86XG9 351 aaPredicted RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 PPP1R9BQ96SB3 815 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 DDX21Q9NR30 783 aaKnown RBP eCLIP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 RAI14Q9P0K7 980 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 USP16Q9Y5T5 823 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 SETD1BQ9UPS6 1966 aaKnown RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 ANKRD18BA2A2Z9 1011 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 KINO60870 393 aaKnown RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 CAMK4Q16566 473 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 MAP3K11Q16584 847 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 CCDC186Q7Z3E2 898 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 C16orf71Q8IYS4 520 aaPredicted RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 LINS1Q8NG48 757 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 SMARCC1Q92922 1105 aaPredicted RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 CLTCQ00610 1675 aaKnown RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 JAKMIP3Q5VZ66 844 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 CPLX2Q6PUV4 134 aaKnown RBP9.52□□□□□ -0.89
NFRKB-203ENST00000524794 PIBF1Q8WXW3 757 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 PLEKHF1Q96S99 279 aa9.52□□□□□ -0.89
NFRKB-203ENST00000524794 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 RAB3GAP1Q15042 981 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 RNF187Q5TA31 235 aaPredicted RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 MPHOSPH10O00566 681 aaKnown RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 PHKG2P15735 406 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 GBP2P32456 591 aaPredicted RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 GLRX3O76003 335 aaKnown RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 IFIT1P09914 478 aaKnown RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 TEX2Q8IWB9 1127 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
NFRKB-203ENST00000524794 TFCP2L1Q9NZI6 479 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 MADDQ8WXG6 1647 aa9.51□□□□□ -0.89
NFRKB-203ENST00000524794 ERBB3P21860 1342 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 RAB11FIP3O75154 756 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 EIF4A1P60842 406 aaKnown RBP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 RBM28Q9NW13 759 aaKnown RBP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 IQSEC3Q9UPP2 1182 aaPredicted RBP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 ERICH2A1L162 156 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 GNPATO15228 680 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 SFPQP23246 707 aaKnown RBP eCLIP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 RBM5P52756 815 aaKnown RBP eCLIP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 MCM6Q14566 821 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 LRCH2Q5VUJ6 765 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 SETDB2Q96T68 719 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 CRACR2AQ9BSW2 395 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.5□□□□□ -0.893e-7■■■■□ 22.6
NFRKB-203ENST00000524794 ARFGAP3Q9NP61 516 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 CPSF2Q9P2I0 782 aaKnown RBP9.5□□□□□ -0.89
NFRKB-203ENST00000524794 USP19O94966 1318 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 VPS53Q5VIR6 699 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 RASSF8Q8NHQ8 419 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 RHPN1Q8TCX5 695 aa9.5□□□□□ -0.89
NFRKB-203ENST00000524794 KCNQ4P56696 695 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 KRT85P78386 507 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 SNW1Q13573 536 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 UPF3BQ9BZI7 483 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ATP7BP35670 1465 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 C6orf229H3BNL8 230 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 HIP1O00291 1037 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 CEP57Q86XR8 500 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ANKRD44Q8N8A2 993 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 RPGRQ92834 1020 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 PAIP2Q9BPZ3 127 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ZBTB40Q9NUA8 1239 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 PRDM4Q9UKN5 801 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ZBTB12Q9Y330 459 aaPredicted RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 RTCBQ9Y3I0 505 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ADGRB3O60242 1522 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 LMTK2Q8IWU2 1503 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 CEBPZQ03701 1054 aaKnown RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 STK3Q13188 491 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 GBP3Q9H0R5 595 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 CCNL1Q9UK58 526 aaPredicted RBP9.49□□□□□ -0.89
NFRKB-203ENST00000524794 AKAP2Q9Y2D5 859 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 AATKQ6ZMQ8 1374 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 SPATA31A3Q5VYP0 1347 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 SERPINC1P01008 464 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 ARHGAP29Q52LW3 1261 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 KLHDC4Q8TBB5 520 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 EFCC1Q9HA90 598 aa9.49□□□□□ -0.89
NFRKB-203ENST00000524794 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 KDM2BQ8NHM5 1336 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 ADGRL3Q9HAR2 1447 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 ALDH1L1O75891 902 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 IRX5P78411 483 aaPredicted RBP9.48□□□□□ -0.89
NFRKB-203ENST00000524794 ZSCAN26Q16670 478 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 CKAP2LQ8IYA6 745 aa9.48□□□□□ -0.89
NFRKB-203ENST00000524794 ASAP1Q9ULH1 1129 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms