RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 TATP17735 454 aaPredicted RBP9.44□□□□□ -0.9
CTR9-202ENST00000524523 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
CTR9-202ENST00000524523 XPCQ01831 940 aaPredicted RBP9.44□□□□□ -0.9
CTR9-202ENST00000524523 ZNF530Q6P9A1 599 aaPredicted RBP9.44□□□□□ -0.9
CTR9-202ENST00000524523 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
CTR9-202ENST00000524523 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
CTR9-202ENST00000524523 HDAC5Q9UQL6 1122 aa9.44□□□□□ -0.9
CTR9-202ENST00000524523 ZNF335Q9H4Z2 1342 aaPredicted RBP9.44□□□□□ -0.9
CTR9-202ENST00000524523 HEG1Q9ULI3 1381 aa9.44□□□□□ -0.9
CTR9-202ENST00000524523 LMO7Q8WWI1 1683 aa9.44□□□□□ -0.9
CTR9-202ENST00000524523 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
CTR9-202ENST00000524523 SLC19A1P41440 591 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 ZC3H6P61129 1189 aaKnown RBP9.43□□□□□ -0.9
CTR9-202ENST00000524523 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
CTR9-202ENST00000524523 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
CTR9-202ENST00000524523 LRRC59Q96AG4 307 aaKnown RBP9.43□□□□□ -0.9
CTR9-202ENST00000524523 DCAF5Q96JK2 942 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 PRDM9Q9NQV7 894 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 TNNQ9UQP3 1299 aa9.43□□□□□ -0.9
CTR9-202ENST00000524523 FAM208AQ9UK61 1670 aaKnown RBP9.42□□□□□ -0.9
CTR9-202ENST00000524523 GNAI3P08754 354 aa9.42□□□□□ -0.9
CTR9-202ENST00000524523 NUCB1Q02818 461 aa9.42□□□□□ -0.9
CTR9-202ENST00000524523 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
CTR9-202ENST00000524523 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
CTR9-202ENST00000524523 WDR17Q8IZU2 1322 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 SPDYE5A6NIY4 337 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 BTBD11A6QL63 1104 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 SPTLC1O15269 473 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 HMMRO75330 724 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 MMP16P51512 607 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 MTMR2Q13614 643 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 CARD10Q9BWT7 1032 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 NLRP2Q9NX02 1062 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
CTR9-202ENST00000524523 PXDNLA1KZ92 1463 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 RGS12O14924 1447 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 COL18A1P39060 1754 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 ADAMTS7Q9UKP4 1686 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
CTR9-202ENST00000524523 PHKG2P15735 406 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 FLIIQ13045 1269 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 USHBP1Q8N6Y0 703 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 ANKRD44Q8N8A2 993 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
CTR9-202ENST00000524523 DCTPP1Q9H773 170 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 MIS18AQ9NYP9 233 aa9.4□□□□□ -0.9
CTR9-202ENST00000524523 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
CTR9-202ENST00000524523 XIRP1Q702N8 1843 aaKnown RBP9.4□□□□□ -0.91
CTR9-202ENST00000524523 CACNA1FO60840 1977 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 ERVV-2B6SEH9 535 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
CTR9-202ENST00000524523 CSB-PGBD3P0DP91 1061 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 HDGFL1Q5TGJ6 251 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 CHD1LQ86WJ1 897 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 IPO9Q96P70 1041 aaKnown RBP9.39□□□□□ -0.91
CTR9-202ENST00000524523 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 PRDM11Q9NQV5 511 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
CTR9-202ENST00000524523 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
CTR9-202ENST00000524523 JUNDP17535 347 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 KRT24Q2M2I5 525 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 MPRIPQ6WCQ1 1025 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 FAM117AQ9C073 453 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
CTR9-202ENST00000524523 CRYBG1Q9Y4K1 1723 aa9.37□□□□□ -0.91
CTR9-202ENST00000524523 GNAI2P04899 355 aa9.37□□□□□ -0.91
CTR9-202ENST00000524523 FKBP5Q13451 457 aaPredicted RBP9.37□□□□□ -0.91
CTR9-202ENST00000524523 PRPF38BQ5VTL8 546 aaKnown RBP9.37□□□□□ -0.91
CTR9-202ENST00000524523 ZNF790Q6PG37 636 aa9.37□□□□□ -0.91
CTR9-202ENST00000524523 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
CTR9-202ENST00000524523 ZCRB1Q8TBF4 217 aaKnown RBP9.37□□□□□ -0.91
CTR9-202ENST00000524523 DDX17Q92841 729 aaKnown RBP9.37□□□□□ -0.91
CTR9-202ENST00000524523 ERBB4Q15303 1308 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 ALDH1L1O75891 902 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
CTR9-202ENST00000524523 RPIAP49247 311 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
CTR9-202ENST00000524523 RGS3P49796 1198 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 CSPP1Q1MSJ5 1256 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 BMP2KLQ5H9B9 411 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 CEP85Q6P2H3 762 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 SIRT2Q8IXJ6 389 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 CCDC24Q8N4L8 307 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
CTR9-202ENST00000524523 EMID1Q96A84 441 aaPredicted RBP9.36□□□□□ -0.91
CTR9-202ENST00000524523 UPF2Q9HAU5 1272 aaKnown RBP9.36□□□□□ -0.91
CTR9-202ENST00000524523 DDX21Q9NR30 783 aaKnown RBP eCLIP9.36□□□□□ -0.91
CTR9-202ENST00000524523 LIMD1Q9UGP4 676 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms