RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 GPR108Q9NPR9 543 aa16.53■□□□□ 0.24
LDLRAD3-202ENST00000524419 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
LDLRAD3-202ENST00000524419 LIMCH1Q9UPQ0 1083 aa16.53■□□□□ 0.24
LDLRAD3-202ENST00000524419 PHLPP1O60346 1717 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 BRD1O95696 1058 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 NECTIN1Q15223 517 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 CREB3L3Q68CJ9 461 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 HAUS7Q99871 368 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 CYP46A1Q9Y6A2 500 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 ZNF609O15014 1411 aa16.52■□□□□ 0.24
LDLRAD3-202ENST00000524419 JCADQ9P266 1359 aa16.52■□□□□ 0.23
LDLRAD3-202ENST00000524419 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 EXOC5O00471 708 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 TRIM28Q13263 835 aaKnown RBP16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 VPS53Q5VIR6 699 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 PDRG1Q9NUG6 133 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 EYA2O00167 538 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 CIAO1O76071 339 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZNF445P59923 1031 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 RNF20Q5VTR2 975 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 RUFY3Q7L099 469 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZSWIM6Q9HCJ5 1215 aa16.51■□□□□ 0.23
LDLRAD3-202ENST00000524419 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
LDLRAD3-202ENST00000524419 EDC3Q96F86 508 aaKnown RBP16.5■□□□□ 0.23
LDLRAD3-202ENST00000524419 MAP3K15Q6ZN16 1313 aa16.5■□□□□ 0.23
LDLRAD3-202ENST00000524419 SLC27A2O14975 620 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 PCCAP05165 728 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 PSMA5P28066 241 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 ADCK5Q3MIX3 580 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 MYH3P11055 1940 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 CPA1P15085 419 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZSCAN31Q96LW9 406 aaPredicted RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 NEUROD6Q96NK8 337 aa16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 WDR33Q9C0J8 1336 aaKnown RBP16.49■□□□□ 0.23
LDLRAD3-202ENST00000524419 CLCN1P35523 988 aa16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 CCDC57Q2TAC2 916 aa16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZNF589Q86UQ0 364 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 CDCA7Q9BWT1 371 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 NUP98P52948 1817 aa16.48■□□□□ 0.23
LDLRAD3-202ENST00000524419 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 PLA2G12BQ9BX93 195 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 ANO8Q9HCE9 1232 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 CCDC9Q9Y3X0 531 aaKnown RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 PALLDQ8WX93 1383 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 CYP19A1P11511 503 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 GIGYF2Q6Y7W6 1299 aaKnown RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 ZBTB38Q8NAP3 1195 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 SYTL4Q96C24 671 aaPredicted RBP16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 NDUFB9Q9Y6M9 179 aa16.47■□□□□ 0.23
LDLRAD3-202ENST00000524419 PRPF40AO75400 957 aaKnown RBP16.46■□□□□ 0.23
LDLRAD3-202ENST00000524419 TAF5LO75529 589 aa16.46■□□□□ 0.23
LDLRAD3-202ENST00000524419 DDX46Q7L014 1031 aaKnown RBP16.46■□□□□ 0.23
LDLRAD3-202ENST00000524419 TICAM2Q86XR7 235 aa16.46■□□□□ 0.23
LDLRAD3-202ENST00000524419 KBTBD3Q8NAB2 608 aa16.46■□□□□ 0.23
LDLRAD3-202ENST00000524419 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 CDHR2Q9BYE9 1310 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 PAG1Q9NWQ8 432 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 CEP126Q9P2H0 1117 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.22
LDLRAD3-202ENST00000524419 NASPP49321 788 aaPredicted RBP16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 TIMM10P62072 90 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 MCMDC2Q4G0Z9 681 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 CAVIN1Q6NZI2 390 aaKnown RBP16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 BLOC1S2Q6QNY1 142 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 TRIM44Q96DX7 344 aaPredicted RBP16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 SLC4A9Q96Q91 983 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 PPP1R9BQ96SB3 815 aa16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 LARP6Q9BRS8 491 aaKnown RBP16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 U3KPZ7 1027 aaPredicted RBP16.45■□□□□ 0.22
LDLRAD3-202ENST00000524419 A0A1B0GUL7 405 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 KRT32Q14532 448 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 PUS3Q9BZE2 481 aaKnown RBP16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 RGS17Q9UGC6 210 aaPredicted RBP16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 AKAP2Q9Y2D5 859 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 NWD2Q9ULI1 1742 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 SPATA31A1Q5TZJ5 1347 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 GOLIM4O00461 696 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 LARGE1O95461 756 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 ANKRD1Q15327 319 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 HLFQ16534 295 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 TSGA10IPQ3SY00 556 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 USPL1Q5W0Q7 1092 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
LDLRAD3-202ENST00000524419 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms