RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 AKAP11Q9UKA4 1901 aa15.45■□□□□ 0.06
SDCBP-211ENST00000523441 RGL2O15211 777 aa15.44■□□□□ 0.06
SDCBP-211ENST00000523441 CDC37L1Q7L3B6 337 aa15.44■□□□□ 0.06
SDCBP-211ENST00000523441 PPP1R42Q7Z4L9 355 aa15.44■□□□□ 0.06
SDCBP-211ENST00000523441 MPNDQ8N594 471 aa15.44■□□□□ 0.06
SDCBP-211ENST00000523441 SUPT20HQ8NEM7 779 aa15.44■□□□□ 0.06
SDCBP-211ENST00000523441 H7C1D1 291 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 TRPA1O75762 1119 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 ANXA1P04083 346 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 HCLS1P14317 486 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-211ENST00000523441 NOGQ13253 232 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 TBC1D10BQ4KMP7 808 aaPredicted RBP15.43■□□□□ 0.06
SDCBP-211ENST00000523441 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 MICALL2Q8IY33 904 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 ZNF34Q8IZ26 560 aa15.43■□□□□ 0.06
SDCBP-211ENST00000523441 ADM5C9JUS6 153 aa15.42■□□□□ 0.06
SDCBP-211ENST00000523441 RIMBP2O15034 1052 aa15.42■□□□□ 0.06
SDCBP-211ENST00000523441 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
SDCBP-211ENST00000523441 KIF23Q02241 960 aaPredicted RBP15.42■□□□□ 0.06
SDCBP-211ENST00000523441 TNIP1Q15025 636 aa15.42■□□□□ 0.06
SDCBP-211ENST00000523441 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
SDCBP-211ENST00000523441 HHIPL1Q96JK4 782 aa15.42■□□□□ 0.06
SDCBP-211ENST00000523441 UTP14AQ9BVJ6 771 aaKnown RBP15.42■□□□□ 0.06
SDCBP-211ENST00000523441 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
SDCBP-211ENST00000523441 RGMBQ6NW40 437 aa15.41■□□□□ 0.06
SDCBP-211ENST00000523441 IBTKQ9P2D0 1353 aaPredicted RBP15.4■□□□□ 0.06
SDCBP-211ENST00000523441 ANKRD36CQ5JPF3 1778 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 YDJCA8MPS7 323 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 NEFMP07197 916 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 EIF4A1P60842 406 aaKnown RBP15.4■□□□□ 0.06
SDCBP-211ENST00000523441 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 AIMP1Q12904 312 aaKnown RBP15.4■□□□□ 0.06
SDCBP-211ENST00000523441 GIGYF2Q6Y7W6 1299 aaKnown RBP15.4■□□□□ 0.06
SDCBP-211ENST00000523441 KRT26Q7Z3Y9 468 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 C2orf69Q8N8R5 385 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 GBA2Q9HCG7 927 aaPredicted RBP15.4■□□□□ 0.06
SDCBP-211ENST00000523441 PGAP2Q9UHJ9 254 aa15.4■□□□□ 0.06
SDCBP-211ENST00000523441 HTATSF1O43719 755 aaKnown RBP15.39■□□□□ 0.05
SDCBP-211ENST00000523441 EGFRP00533 1210 aa15.39■□□□□ 0.05
SDCBP-211ENST00000523441 PPP2R1AP30153 589 aa15.39■□□□□ 0.05
SDCBP-211ENST00000523441 DDX46Q7L014 1031 aaKnown RBP15.39■□□□□ 0.05
SDCBP-211ENST00000523441 SP8Q8IXZ3 490 aa15.39■□□□□ 0.05
SDCBP-211ENST00000523441 ZC3H15Q8WU90 426 aaKnown RBP15.39■□□□□ 0.05
SDCBP-211ENST00000523441 RNF186Q9NXI6 227 aa15.39■□□□□ 0.05
SDCBP-211ENST00000523441 PSMD14O00487 310 aa15.38■□□□□ 0.05
SDCBP-211ENST00000523441 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
SDCBP-211ENST00000523441 DCPSQ96C86 337 aaKnown RBP15.38■□□□□ 0.05
SDCBP-211ENST00000523441 RTFDC1Q9BY42 306 aaPredicted RBP15.38■□□□□ 0.05
SDCBP-211ENST00000523441 FAM155AB1AL88 458 aaPredicted RBP15.37■□□□□ 0.05
SDCBP-211ENST00000523441 BBOX1O75936 387 aa15.37■□□□□ 0.05
SDCBP-211ENST00000523441 DOK7Q18PE1 504 aa15.37■□□□□ 0.05
SDCBP-211ENST00000523441 PROSER3Q2NL68 480 aa15.37■□□□□ 0.05
SDCBP-211ENST00000523441 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
SDCBP-211ENST00000523441 VPS33BQ9H267 617 aa15.37■□□□□ 0.05
SDCBP-211ENST00000523441 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
SDCBP-211ENST00000523441 CDHR2Q9BYE9 1310 aa15.37■□□□□ 0.05
SDCBP-211ENST00000523441 C6orf229H3BNL8 230 aa15.36■□□□□ 0.05
SDCBP-211ENST00000523441 KCNQ5Q9NR82 932 aa15.36■□□□□ 0.05
SDCBP-211ENST00000523441 NSFL1CQ9UNZ2 370 aaKnown RBP15.36■□□□□ 0.05
SDCBP-211ENST00000523441 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
SDCBP-211ENST00000523441 GRAPQ13588 217 aa15.35■□□□□ 0.05
SDCBP-211ENST00000523441 WASHC4Q2M389 1173 aa15.35■□□□□ 0.05
SDCBP-211ENST00000523441 GRAPLQ8TC17 118 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-211ENST00000523441 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
SDCBP-211ENST00000523441 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
SDCBP-211ENST00000523441 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
SDCBP-211ENST00000523441 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
SDCBP-211ENST00000523441 SLC10A5Q5PT55 438 aa15.34■□□□□ 0.05
SDCBP-211ENST00000523441 CTU1Q7Z7A3 348 aaKnown RBP15.34■□□□□ 0.05
SDCBP-211ENST00000523441 SCAF8Q9UPN6 1271 aaKnown RBP15.34■□□□□ 0.05
SDCBP-211ENST00000523441 PRPF38BQ5VTL8 546 aaKnown RBP15.33■□□□□ 0.04
SDCBP-211ENST00000523441 COPS6Q7L5N1 327 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 NLRP10Q86W26 655 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 XAGE3Q8WTP9 111 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 SAGE1Q9NXZ1 904 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 GGA3Q9NZ52 723 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.04
SDCBP-211ENST00000523441 DDX60Q8IY21 1712 aaKnown RBP15.33■□□□□ 0.04
SDCBP-211ENST00000523441 G3V3G9 751 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 ECE2O60344 883 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 DCAF8Q5TAQ9 597 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 SULF1Q8IWU6 871 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.32■□□□□ 0.04
SDCBP-211ENST00000523441 HPS5Q9UPZ3 1129 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 COL4A1P02462 1669 aa15.32■□□□□ 0.04
SDCBP-211ENST00000523441 LRRC37AA6NMS7 1700 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 SLC10A3P09131 477 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 GPSM2P81274 684 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
SDCBP-211ENST00000523441 PDIA6Q15084 440 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 CELF1Q92879 486 aaKnown RBP15.31■□□□□ 0.04
SDCBP-211ENST00000523441 CDCA5Q96FF9 252 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 SH3TC1Q8TE82 1336 aa15.31■□□□□ 0.04
SDCBP-211ENST00000523441 SCN9AQ15858 1988 aa15.3■□□□□ 0.04
SDCBP-211ENST00000523441 MOB2Q70IA6 237 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms