RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RASAL3Q86YV0 1011 aa18.68■□□□□ 0.58
NKX3-1-202ENST00000523261 DPF2Q92785 391 aa18.68■□□□□ 0.58
NKX3-1-202ENST00000523261 ZBTB12Q9Y330 459 aaPredicted RBP18.68■□□□□ 0.58
NKX3-1-202ENST00000523261 NTSR2O95665 410 aa18.67■□□□□ 0.58
NKX3-1-202ENST00000523261 GPTP24298 496 aa18.67■□□□□ 0.58
NKX3-1-202ENST00000523261 TBC1D10BQ4KMP7 808 aaPredicted RBP18.67■□□□□ 0.58
NKX3-1-202ENST00000523261 MAP3K15Q6ZN16 1313 aa18.67■□□□□ 0.58
NKX3-1-202ENST00000523261 COL3A1P02461 1466 aaPredicted RBP18.66■□□□□ 0.58
NKX3-1-202ENST00000523261 DCPSQ96C86 337 aaKnown RBP18.66■□□□□ 0.58
NKX3-1-202ENST00000523261 ABCC4O15439 1325 aa18.66■□□□□ 0.58
NKX3-1-202ENST00000523261 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
NKX3-1-202ENST00000523261 MPNDQ8N594 471 aa18.65■□□□□ 0.58
NKX3-1-202ENST00000523261 LAMB4A4D0S4 1761 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 TTLL7Q6ZT98 887 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 SP8Q8IXZ3 490 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 ZNF34Q8IZ26 560 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 NGEFQ8N5V2 710 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 PHACTR3Q96KR7 559 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 NLRP3Q96P20 1036 aa18.64■□□□□ 0.57
NKX3-1-202ENST00000523261 U2SURPO15042 1029 aaKnown RBP18.63■□□□□ 0.57
NKX3-1-202ENST00000523261 NOM1Q5C9Z4 860 aaKnown RBP18.63■□□□□ 0.57
NKX3-1-202ENST00000523261 DUOX1Q9NRD9 1551 aa18.63■□□□□ 0.57
NKX3-1-202ENST00000523261 GPR25O00155 361 aa18.62■□□□□ 0.57
NKX3-1-202ENST00000523261 PSMD14O00487 310 aa18.62■□□□□ 0.57
NKX3-1-202ENST00000523261 BBOX1O75936 387 aa18.62■□□□□ 0.57
NKX3-1-202ENST00000523261 RBM26Q5T8P6 1007 aaKnown RBP18.62■□□□□ 0.57
NKX3-1-202ENST00000523261 CDCA5Q96FF9 252 aa18.62■□□□□ 0.57
NKX3-1-202ENST00000523261 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
NKX3-1-202ENST00000523261 SULF1Q8IWU6 871 aa18.61■□□□□ 0.57
NKX3-1-202ENST00000523261 HTTP42858 3142 aa18.61■□□□□ 0.57
NKX3-1-202ENST00000523261 POTEFA5A3E0 1075 aa18.6■□□□□ 0.57
NKX3-1-202ENST00000523261 SLC10A5Q5PT55 438 aa18.6■□□□□ 0.57
NKX3-1-202ENST00000523261 ZBTB3Q9H5J0 574 aa18.6■□□□□ 0.57
NKX3-1-202ENST00000523261 GGA3Q9NZ52 723 aa18.6■□□□□ 0.57
NKX3-1-202ENST00000523261 ASTN2O75129 1339 aaPredicted RBP18.59■□□□□ 0.57
NKX3-1-202ENST00000523261 RPS12P25398 132 aaKnown RBP18.59■□□□□ 0.57
NKX3-1-202ENST00000523261 MCM10Q7L590 875 aa18.59■□□□□ 0.57
NKX3-1-202ENST00000523261 PPP1R42Q7Z4L9 355 aa18.59■□□□□ 0.57
NKX3-1-202ENST00000523261 PAPPA2Q9BXP8 1791 aa18.59■□□□□ 0.57
NKX3-1-202ENST00000523261 KIAA0100Q14667 2235 aaKnown RBP18.58■□□□□ 0.57
NKX3-1-202ENST00000523261 LAMB2P55268 1798 aa18.58■□□□□ 0.57
NKX3-1-202ENST00000523261 TRIOBPQ9H2D6 2365 aa18.58■□□□□ 0.56
NKX3-1-202ENST00000523261 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
NKX3-1-202ENST00000523261 FKBP1BP68106 108 aa18.58■□□□□ 0.56
NKX3-1-202ENST00000523261 KIF4BQ2VIQ3 1234 aa18.58■□□□□ 0.56
NKX3-1-202ENST00000523261 SZT2Q5T011 3432 aa18.58■□□□□ 0.56
NKX3-1-202ENST00000523261 PRKAR2BP31323 418 aa18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 TM4SF4P48230 202 aa18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 GIGYF2Q6Y7W6 1299 aaKnown RBP18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 DBNDD1Q9H9R9 158 aa18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 COLQQ9Y215 455 aaPredicted RBP18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 RRP7AQ9Y3A4 280 aaKnown RBP18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 ANKRD36CQ5JPF3 1778 aa18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 RBBP6Q7Z6E9 1792 aaKnown RBP18.57■□□□□ 0.56
NKX3-1-202ENST00000523261 RTL9Q8NET4 1388 aa18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 FKTNO75072 461 aa18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 PARP10Q53GL7 1025 aa18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 LRRC37AA6NMS7 1700 aa18.56■□□□□ 0.56
NKX3-1-202ENST00000523261 CEP290O15078 2479 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 DLL1O00548 723 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 INTS3Q68E01 1043 aaKnown RBP18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 CFHR5Q9BXR6 569 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 R3HDMLQ9H3Y0 253 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 KCNQ5Q9NR82 932 aa18.55■□□□□ 0.56
NKX3-1-202ENST00000523261 TAF1P21675 1872 aa18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 MYL6BP14649 208 aa18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 GRAPQ13588 217 aa18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 GRAPLQ8TC17 118 aaPredicted RBP18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 UTP14AQ9BVJ6 771 aaKnown RBP18.54■□□□□ 0.56
NKX3-1-202ENST00000523261 WASHC4Q2M389 1173 aa18.53■□□□□ 0.56
NKX3-1-202ENST00000523261 DDX46Q7L014 1031 aaKnown RBP18.53■□□□□ 0.56
NKX3-1-202ENST00000523261 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
NKX3-1-202ENST00000523261 CENPFP49454 3210 aa18.53■□□□□ 0.56
NKX3-1-202ENST00000523261 DDX60Q8IY21 1712 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-202ENST00000523261 BRCA2P51587 3418 aa18.52■□□□□ 0.56
NKX3-1-202ENST00000523261 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
NKX3-1-202ENST00000523261 CC2D1BQ5T0F9 858 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-202ENST00000523261 ANGEL2Q5VTE6 544 aaKnown RBP18.52■□□□□ 0.56
NKX3-1-202ENST00000523261 CUL9Q8IWT3 2517 aa18.52■□□□□ 0.55
NKX3-1-202ENST00000523261 UBE2Q2LH0YL09 131 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 RIMBP2O15034 1052 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 ECE2O60344 883 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 HCLS1P14317 486 aaPredicted RBP18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 TMC4Q7Z404 712 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 TIMELESSQ9UNS1 1208 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 SCN9AQ15858 1988 aa18.51■□□□□ 0.55
NKX3-1-202ENST00000523261 SCARF1Q14162 830 aa18.5■□□□□ 0.55
NKX3-1-202ENST00000523261 PER1O15534 1290 aaPredicted RBP18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 HTATSF1O43719 755 aaKnown RBP18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 EN2P19622 333 aaPredicted RBP18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 DOK7Q18PE1 504 aa18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 POLLQ9UGP5 575 aa18.49■□□□□ 0.55
NKX3-1-202ENST00000523261 TRIM17Q9Y577 477 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms