RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 DXOO77932 396 aaKnown RBP8.71□□□□□ -1.02
CSMD1-211ENST00000523062 VSIG8P0DPA2 414 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 AMOTQ4VCS5 1084 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 PLEKHO1Q53GL0 409 aaPredicted RBP8.71□□□□□ -1.02
CSMD1-211ENST00000523062 SULF1Q8IWU6 871 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 DDX17Q92841 729 aaKnown RBP8.71□□□□□ -1.02
CSMD1-211ENST00000523062 SLAIN2Q9P270 581 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.02
CSMD1-211ENST00000523062 LMO7Q8WWI1 1683 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 CRYBG1Q9Y4K1 1723 aa8.71□□□□□ -1.02
CSMD1-211ENST00000523062 GDF11O95390 407 aa8.7□□□□□ -1.02
CSMD1-211ENST00000523062 ITPRIPQ8IWB1 547 aa8.7□□□□□ -1.02
CSMD1-211ENST00000523062 NLRP7Q8WX94 980 aa8.7□□□□□ -1.02
CSMD1-211ENST00000523062 LRRC59Q96AG4 307 aaKnown RBP8.7□□□□□ -1.02
CSMD1-211ENST00000523062 API5Q9BZZ5 524 aaKnown RBP8.7□□□□□ -1.02
CSMD1-211ENST00000523062 CHMP4BQ9H444 224 aaKnown RBP8.7□□□□□ -1.02
CSMD1-211ENST00000523062 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-211ENST00000523062 SOS2Q07890 1332 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-211ENST00000523062 OVOS2A0A0G2JMS6 1433 aa8.7□□□□□ -1.02
CSMD1-211ENST00000523062 FAM208AQ9UK61 1670 aaKnown RBP8.69□□□□□ -1.02
CSMD1-211ENST00000523062 ELL2O00472 640 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-211ENST00000523062 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
CSMD1-211ENST00000523062 ZNF530Q6P9A1 599 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-211ENST00000523062 TMEM57Q8N5G2 664 aa8.69□□□□□ -1.02
CSMD1-211ENST00000523062 ABCC4O15439 1325 aa8.69□□□□□ -1.02
CSMD1-211ENST00000523062 CEMIPQ8WUJ3 1361 aa8.69□□□□□ -1.02
CSMD1-211ENST00000523062 RGPD2P0DJD1 1756 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 COL18A1P39060 1754 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 SIAH2O43255 324 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 RASSF7Q02833 373 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 TAF7Q15545 349 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-211ENST00000523062 AKAP4Q5JQC9 854 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 C1orf141Q5JVX7 400 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 IL17REQ8NFR9 667 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 ZFP42Q96MM3 310 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
CSMD1-211ENST00000523062 WASF2Q9Y6W5 498 aa8.68□□□□□ -1.02
CSMD1-211ENST00000523062 PTPRCP08575 1304 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 CSB-PGBD3P0DP91 1061 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 KRT24Q2M2I5 525 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 NHSL1Q5SYE7 1610 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 USB1Q9BQ65 265 aaKnown RBP8.67□□□□□ -1.02
CSMD1-211ENST00000523062 NLRP2Q9NX02 1062 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 PCDHB15Q9Y5E8 787 aa8.67□□□□□ -1.02
CSMD1-211ENST00000523062 RNF225M0QZC1 329 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-211ENST00000523062 IGHDP01880 384 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-211ENST00000523062 CABLES1Q8TDN4 633 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 RAPGEF4Q8WZA2 1011 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 PHOX2BQ99453 314 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 ZBTB40Q9NUA8 1239 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 MIS18AQ9NYP9 233 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 RGPD5Q99666 1765 aa8.66□□□□□ -1.02
CSMD1-211ENST00000523062 RGS12O14924 1447 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 RNMTO43148 476 aaKnown RBP8.65□□□□□ -1.02
CSMD1-211ENST00000523062 HOXB7P09629 217 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 TEFQ10587 303 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 HDAC1Q13547 482 aaPredicted RBP8.65□□□□□ -1.02
CSMD1-211ENST00000523062 CHRNA2Q15822 529 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 CCDC30Q5VVM6 783 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 STK31Q9BXU1 1019 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 PRDM11Q9NQV5 511 aa8.65□□□□□ -1.02
CSMD1-211ENST00000523062 ABCA3Q99758 1704 aa8.65□□□□□ -1.03
CSMD1-211ENST00000523062 GNPATO15228 680 aa8.64□□□□□ -1.03
CSMD1-211ENST00000523062 EHBP1Q8NDI1 1231 aa8.64□□□□□ -1.03
CSMD1-211ENST00000523062 SPG7Q9UQ90 795 aa8.64□□□□□ -1.03
CSMD1-211ENST00000523062 ADAMTS7Q9UKP4 1686 aa8.64□□□□□ -1.03
CSMD1-211ENST00000523062 MEGF6O75095 1541 aa8.64□□□□□ -1.03
CSMD1-211ENST00000523062 KDM3BQ7LBC6 1761 aa8.63□□□□□ -1.03
CSMD1-211ENST00000523062 SEMA3EO15041 775 aa8.63□□□□□ -1.03
CSMD1-211ENST00000523062 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
CSMD1-211ENST00000523062 ILDR2Q71H61 639 aa8.63□□□□□ -1.03
CSMD1-211ENST00000523062 SKAP1Q86WV1 359 aa8.63□□□□□ -1.03
CSMD1-211ENST00000523062 LGR6Q9HBX8 967 aa8.63□□□□□ -1.03
CSMD1-211ENST00000523062 AHDC1Q5TGY3 1603 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-211ENST00000523062 WDR17Q8IZU2 1322 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 BTBD11A6QL63 1104 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 SOCS7O14512 581 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 ZBTB7BO15156 539 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-211ENST00000523062 RGS3P49796 1198 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 EIF4A1P60842 406 aaKnown RBP8.62□□□□□ -1.03
CSMD1-211ENST00000523062 SCARF1Q14162 830 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 HDGFL1Q5TGJ6 251 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 MPRIPQ6WCQ1 1025 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 BACH2Q9BYV9 841 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 PKD1L3Q7Z443 1732 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 COL5A2P05997 1499 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-211ENST00000523062 LTBP4Q8N2S1 1624 aa8.62□□□□□ -1.03
CSMD1-211ENST00000523062 GPR37O15354 613 aa8.61□□□□□ -1.03
CSMD1-211ENST00000523062 HSP90AB1P08238 724 aaKnown RBP8.61□□□□□ -1.03
CSMD1-211ENST00000523062 PHKG2P15735 406 aa8.61□□□□□ -1.03
CSMD1-211ENST00000523062 CCT4P50991 539 aaKnown RBP8.61□□□□□ -1.03
CSMD1-211ENST00000523062 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
CSMD1-211ENST00000523062 IFNL2Q8IZJ0 200 aa8.61□□□□□ -1.03
CSMD1-211ENST00000523062 PXDNLA1KZ92 1463 aa8.61□□□□□ -1.03
CSMD1-211ENST00000523062 MRC1P22897 1456 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms